Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Gm24274-201ENSMUST00000116787 124 ntBASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Gm13728-201ENSMUST00000117471 400 ntBASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Gm12697-201ENSMUST00000118008 667 ntBASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Gm8858-201ENSMUST00000118259 342 ntBASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Gm12304-201ENSMUST00000120312 385 ntBASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Gm12779-201ENSMUST00000121496 143 ntBASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Gm23829-201ENSMUST00000157392 270 ntBASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Gm24315-201ENSMUST00000177835 127 ntBASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Gm25020-201ENSMUST00000178071 107 ntBASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Gm24862-201ENSMUST00000179103 79 ntBASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Gm23310-201ENSMUST00000179105 79 ntBASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Gm25461-201ENSMUST00000179293 79 ntBASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Gm22631-201ENSMUST00000179656 94 ntBASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Gm3724-201ENSMUST00000197957 349 ntBASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Gm43680-201ENSMUST00000199466 340 ntBASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Gm23093-201ENSMUST00000083450 102 ntBASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Ccdc43Q9CR29 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.39□□□□□ -2.03
Ccdc43Q9CR29 Gm24907-201ENSMUST00000116932 128 ntBASIC2.39□□□□□ -2.03
Ccdc43Q9CR29 Gm14943-201ENSMUST00000118056 546 ntBASIC2.39□□□□□ -2.03
Ccdc43Q9CR29 Gm14530-201ENSMUST00000122391 333 ntBASIC2.39□□□□□ -2.03
Ccdc43Q9CR29 Gm24053-201ENSMUST00000158620 105 ntBASIC2.39□□□□□ -2.03
Ccdc43Q9CR29 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.39□□□□□ -2.03
Ccdc43Q9CR29 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC2.39□□□□□ -2.03
Ccdc43Q9CR29 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC2.39□□□□□ -2.03
Ccdc43Q9CR29 AC153541.1-201ENSMUST00000213786 294 ntBASIC2.39□□□□□ -2.03
Ccdc43Q9CR29 AC134334.1-201ENSMUST00000214277 255 ntBASIC2.39□□□□□ -2.03
Ccdc43Q9CR29 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.39□□□□□ -2.03
Ccdc43Q9CR29 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Ccdc43Q9CR29 Gm25586-201ENSMUST00000082499 112 ntBASIC2.39□□□□□ -2.03
Ccdc43Q9CR29 Gm26265-201ENSMUST00000083277 135 ntBASIC2.39□□□□□ -2.03
Ccdc43Q9CR29 Mir300-201ENSMUST00000083485 79 ntBASIC2.39□□□□□ -2.03
Ccdc43Q9CR29 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Ccdc43Q9CR29 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 Gm24068-201ENSMUST00000104513 132 ntBASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 Gm11363-201ENSMUST00000121672 548 ntBASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 Gm25339-201ENSMUST00000157458 232 ntBASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 Gm22192-201ENSMUST00000175128 85 ntBASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 Mir7081-201ENSMUST00000184490 75 ntBASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 Gm28404-201ENSMUST00000190242 453 ntBASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 Gm43083-201ENSMUST00000199594 476 ntBASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 Gm44870-201ENSMUST00000207291 357 ntBASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 AC153141.1-201ENSMUST00000218636 501 ntBASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 Gm25632-201ENSMUST00000083112 85 ntBASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.38□□□□□ -2.03
Ccdc43Q9CR29 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm14894-201ENSMUST00000117170 270 ntBASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm12721-201ENSMUST00000120621 268 ntBASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm13341-201ENSMUST00000120780 672 ntBASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm23212-201ENSMUST00000122718 60 ntBASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm22257-201ENSMUST00000158687 301 ntBASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm25162-201ENSMUST00000158906 159 ntBASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm24418-201ENSMUST00000177597 79 ntBASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm24639-201ENSMUST00000178518 79 ntBASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm23076-201ENSMUST00000179082 79 ntBASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm25077-201ENSMUST00000179157 79 ntBASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm29231-201ENSMUST00000179850 319 ntBASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm37449-201ENSMUST00000193016 270 ntBASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm18658-201ENSMUST00000195558 270 ntBASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm43865-201ENSMUST00000204721 127 ntBASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm44910-201ENSMUST00000208451 396 ntBASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Gm35558-203ENSMUST00000222264 204 ntBASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Ccdc43Q9CR29 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Ccdc43Q9CR29 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.36□□□□□ -2.03
Ccdc43Q9CR29 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Ccdc43Q9CR29 Gm13885-201ENSMUST00000117569 187 ntBASIC2.36□□□□□ -2.03
Ccdc43Q9CR29 Gm15215-201ENSMUST00000117773 489 ntBASIC2.36□□□□□ -2.03
Ccdc43Q9CR29 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Ccdc43Q9CR29 Gm6182-201ENSMUST00000156439 1208 ntBASIC2.36□□□□□ -2.03
Ccdc43Q9CR29 Gm22093-201ENSMUST00000158980 111 ntBASIC2.36□□□□□ -2.03
Ccdc43Q9CR29 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC2.36□□□□□ -2.03
Ccdc43Q9CR29 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Ccdc43Q9CR29 Gm27399-201ENSMUST00000184250 78 ntBASIC2.36□□□□□ -2.03
Ccdc43Q9CR29 Gm18356-201ENSMUST00000185677 623 ntBASIC2.36□□□□□ -2.03
Ccdc43Q9CR29 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms