Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Mir127-201ENSMUST00000093568 70 ntBASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Gm26015-201ENSMUST00000104402 125 ntBASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Gm13903-201ENSMUST00000120945 193 ntBASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Gm25325-201ENSMUST00000122559 86 ntBASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Gm22277-201ENSMUST00000157204 277 ntBASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Gm22192-201ENSMUST00000175128 85 ntBASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Gm20689-201ENSMUST00000176033 279 ntBASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Gm43529-201ENSMUST00000199178 412 ntBASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Mir497-201ENSMUST00000200557 84 ntBASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Gm44256-201ENSMUST00000203304 335 ntBASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 AC192616.1-201ENSMUST00000221922 132 ntBASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Gm25632-201ENSMUST00000083112 85 ntBASIC1.47□□□□□ -2.17
RTRAFQ9CQE8 Gm25407-201ENSMUST00000104102 134 ntBASIC1.46□□□□□ -2.18
RTRAFQ9CQE8 Gm24889-201ENSMUST00000104388 132 ntBASIC1.46□□□□□ -2.18
RTRAFQ9CQE8 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.46□□□□□ -2.18
RTRAFQ9CQE8 Gm14638-201ENSMUST00000121338 216 ntBASIC1.46□□□□□ -2.18
RTRAFQ9CQE8 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.46□□□□□ -2.18
RTRAFQ9CQE8 Gm23752-201ENSMUST00000157584 115 ntBASIC1.46□□□□□ -2.18
RTRAFQ9CQE8 Snord11-201ENSMUST00000158468 84 ntBASIC1.46□□□□□ -2.18
RTRAFQ9CQE8 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
RTRAFQ9CQE8 Gm24518-201ENSMUST00000180275 94 ntBASIC1.46□□□□□ -2.18
RTRAFQ9CQE8 Gm28282-201ENSMUST00000186072 186 ntBASIC1.46□□□□□ -2.18
RTRAFQ9CQE8 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.46□□□□□ -2.18
RTRAFQ9CQE8 Gm18775-201ENSMUST00000190763 586 ntBASIC1.46□□□□□ -2.18
RTRAFQ9CQE8 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.46□□□□□ -2.18
RTRAFQ9CQE8 Gm44011-201ENSMUST00000203336 394 ntBASIC1.46□□□□□ -2.18
RTRAFQ9CQE8 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.46□□□□□ -2.18
RTRAFQ9CQE8 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.46□□□□□ -2.18
RTRAFQ9CQE8 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.46□□□□□ -2.18
RTRAFQ9CQE8 Mir10a-201ENSMUST00000083585 110 ntBASIC1.46□□□□□ -2.18
RTRAFQ9CQE8 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
RTRAFQ9CQE8 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC1.46□□□□□ -2.18
RTRAFQ9CQE8 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Gm36944-201ENSMUST00000192257 2759 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Gm23422-201ENSMUST00000102000 107 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Gm12393-201ENSMUST00000117084 848 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Gm13804-201ENSMUST00000119552 172 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Gm14551-201ENSMUST00000120802 256 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Gm12779-201ENSMUST00000121496 143 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Gm14530-201ENSMUST00000122391 333 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Gm26102-201ENSMUST00000157251 284 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Gm26345-201ENSMUST00000157534 120 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Gm27396-201ENSMUST00000157708 58 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Gm23641-201ENSMUST00000157857 101 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Gm25454-201ENSMUST00000157947 315 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Gm27265-201ENSMUST00000183559 77 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Mir6975-201ENSMUST00000184879 61 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Mir7028-201ENSMUST00000185016 64 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Gm43083-201ENSMUST00000199594 476 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 CT025689.4-201ENSMUST00000225926 601 ntBASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
RTRAFQ9CQE8 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
RTRAFQ9CQE8 Gm22497-201ENSMUST00000104499 131 ntBASIC1.44□□□□□ -2.18
RTRAFQ9CQE8 Gm11407-201ENSMUST00000120362 1058 ntBASIC1.44□□□□□ -2.18
RTRAFQ9CQE8 Gm23718-201ENSMUST00000157350 307 ntBASIC1.44□□□□□ -2.18
RTRAFQ9CQE8 Gm23381-201ENSMUST00000157676 94 ntBASIC1.44□□□□□ -2.18
RTRAFQ9CQE8 Gm24053-201ENSMUST00000158620 105 ntBASIC1.44□□□□□ -2.18
RTRAFQ9CQE8 Gm24222-201ENSMUST00000158834 93 ntBASIC1.44□□□□□ -2.18
RTRAFQ9CQE8 Gm26157-201ENSMUST00000158974 126 ntBASIC1.44□□□□□ -2.18
RTRAFQ9CQE8 Gm16162-201ENSMUST00000162296 297 ntBASIC1.44□□□□□ -2.18
RTRAFQ9CQE8 Gm23862-201ENSMUST00000180342 94 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms