Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC1.7□□□□□ -2.14
Use1Q9CQ56 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.7□□□□□ -2.14
Use1Q9CQ56 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Use1Q9CQ56 Gm22620-201ENSMUST00000082700 133 ntBASIC1.7□□□□□ -2.14
Use1Q9CQ56 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Use1Q9CQ56 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Use1Q9CQ56 Gm13368-201ENSMUST00000122443 430 ntBASIC1.69□□□□□ -2.14
Use1Q9CQ56 Gm23172-201ENSMUST00000157160 124 ntBASIC1.69□□□□□ -2.14
Use1Q9CQ56 Gm22597-201ENSMUST00000157602 80 ntBASIC1.69□□□□□ -2.14
Use1Q9CQ56 Mir3086-201ENSMUST00000175072 87 ntBASIC1.69□□□□□ -2.14
Use1Q9CQ56 Gm22633-201ENSMUST00000179834 107 ntBASIC1.69□□□□□ -2.14
Use1Q9CQ56 Gm37102-201ENSMUST00000195740 1105 ntBASIC1.69□□□□□ -2.14
Use1Q9CQ56 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC1.69□□□□□ -2.14
Use1Q9CQ56 Gm42164-201ENSMUST00000198881 379 ntBASIC1.69□□□□□ -2.14
Use1Q9CQ56 Gm44256-201ENSMUST00000203304 335 ntBASIC1.69□□□□□ -2.14
Use1Q9CQ56 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.69□□□□□ -2.14
Use1Q9CQ56 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.69□□□□□ -2.14
Use1Q9CQ56 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.69□□□□□ -2.14
Use1Q9CQ56 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.69□□□□□ -2.14
Use1Q9CQ56 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.69□□□□□ -2.14
Use1Q9CQ56 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.69□□□□□ -2.14
Use1Q9CQ56 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.69□□□□□ -2.14
Use1Q9CQ56 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
Use1Q9CQ56 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC1.68□□□□□ -2.14
Use1Q9CQ56 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.68□□□□□ -2.14
Use1Q9CQ56 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.68□□□□□ -2.14
Use1Q9CQ56 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Use1Q9CQ56 Trav20-201ENSMUST00000142754 347 ntBASIC1.68□□□□□ -2.14
Use1Q9CQ56 Gm26102-201ENSMUST00000157251 284 ntBASIC1.68□□□□□ -2.14
Use1Q9CQ56 Gm22076-201ENSMUST00000158601 84 ntBASIC1.68□□□□□ -2.14
Use1Q9CQ56 Gm7953-201ENSMUST00000168278 469 ntBASIC1.68□□□□□ -2.14
Use1Q9CQ56 Gm24333-201ENSMUST00000175101 84 ntBASIC1.68□□□□□ -2.14
Use1Q9CQ56 Gm22192-201ENSMUST00000175128 85 ntBASIC1.68□□□□□ -2.14
Use1Q9CQ56 Gm24573-201ENSMUST00000175499 112 ntBASIC1.68□□□□□ -2.14
Use1Q9CQ56 Gm23619-201ENSMUST00000178411 94 ntBASIC1.68□□□□□ -2.14
Use1Q9CQ56 Gm25474-201ENSMUST00000179052 94 ntBASIC1.68□□□□□ -2.14
Use1Q9CQ56 Gm22047-201ENSMUST00000179176 94 ntBASIC1.68□□□□□ -2.14
Use1Q9CQ56 Gm37377-201ENSMUST00000191733 304 ntBASIC1.68□□□□□ -2.14
Use1Q9CQ56 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.68□□□□□ -2.14
Use1Q9CQ56 Gm43431-201ENSMUST00000198577 340 ntBASIC1.68□□□□□ -2.14
Use1Q9CQ56 Gm43529-201ENSMUST00000199178 412 ntBASIC1.68□□□□□ -2.14
Use1Q9CQ56 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.68□□□□□ -2.14
Use1Q9CQ56 CT009550.5-201ENSMUST00000226286 382 ntBASIC1.68□□□□□ -2.14
Use1Q9CQ56 Gm24921-201ENSMUST00000083024 107 ntBASIC1.68□□□□□ -2.14
Use1Q9CQ56 Gm25632-201ENSMUST00000083112 85 ntBASIC1.68□□□□□ -2.14
Use1Q9CQ56 Gm22578-201ENSMUST00000083730 107 ntBASIC1.68□□□□□ -2.14
Use1Q9CQ56 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Use1Q9CQ56 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
Use1Q9CQ56 Gm25168-201ENSMUST00000104189 132 ntBASIC1.67□□□□□ -2.14
Use1Q9CQ56 Gm15659-201ENSMUST00000118881 341 ntBASIC1.67□□□□□ -2.14
Use1Q9CQ56 Gm15536-201ENSMUST00000121411 114 ntBASIC1.67□□□□□ -2.14
Use1Q9CQ56 Gm24168-201ENSMUST00000178825 107 ntBASIC1.67□□□□□ -2.14
Use1Q9CQ56 Gm25457-201ENSMUST00000179509 107 ntBASIC1.67□□□□□ -2.14
Use1Q9CQ56 Gm9892-201ENSMUST00000182415 992 ntBASIC1.67□□□□□ -2.14
Use1Q9CQ56 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
Use1Q9CQ56 Gm28438-201ENSMUST00000188299 345 ntBASIC1.67□□□□□ -2.14
Use1Q9CQ56 Gm37361-201ENSMUST00000194345 132 ntBASIC1.67□□□□□ -2.14
Use1Q9CQ56 Gm43004-201ENSMUST00000201872 703 ntBASIC1.67□□□□□ -2.14
Use1Q9CQ56 Gm44564-201ENSMUST00000207985 180 ntBASIC1.67□□□□□ -2.14
Use1Q9CQ56 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Use1Q9CQ56 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Use1Q9CQ56 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Use1Q9CQ56 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.67□□□□□ -2.14
Use1Q9CQ56 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.66□□□□□ -2.14
Use1Q9CQ56 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.66□□□□□ -2.14
Use1Q9CQ56 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Use1Q9CQ56 Gm13728-201ENSMUST00000117471 400 ntBASIC1.66□□□□□ -2.14
Use1Q9CQ56 Gm14765-201ENSMUST00000121954 326 ntBASIC1.66□□□□□ -2.14
Use1Q9CQ56 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.66□□□□□ -2.14
Use1Q9CQ56 Gm25625-201ENSMUST00000157221 96 ntBASIC1.66□□□□□ -2.14
Use1Q9CQ56 Gm22603-201ENSMUST00000157603 96 ntBASIC1.66□□□□□ -2.14
Use1Q9CQ56 Gm23181-201ENSMUST00000158685 110 ntBASIC1.66□□□□□ -2.14
Use1Q9CQ56 Gm22666-201ENSMUST00000158717 164 ntBASIC1.66□□□□□ -2.14
Use1Q9CQ56 Gm16162-201ENSMUST00000162296 297 ntBASIC1.66□□□□□ -2.14
Use1Q9CQ56 Gm18396-201ENSMUST00000177095 361 ntBASIC1.66□□□□□ -2.14
Use1Q9CQ56 Mir7081-201ENSMUST00000184490 75 ntBASIC1.66□□□□□ -2.14
Use1Q9CQ56 Mir7241-201ENSMUST00000184532 64 ntBASIC1.66□□□□□ -2.14
Use1Q9CQ56 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.66□□□□□ -2.14
Use1Q9CQ56 Gm42475-201ENSMUST00000201212 295 ntBASIC1.66□□□□□ -2.14
Use1Q9CQ56 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.66□□□□□ -2.14
Use1Q9CQ56 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Use1Q9CQ56 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.66□□□□□ -2.14
Use1Q9CQ56 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.66□□□□□ -2.14
Use1Q9CQ56 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.66□□□□□ -2.14
Use1Q9CQ56 Gm22062-201ENSMUST00000082563 107 ntBASIC1.66□□□□□ -2.14
Use1Q9CQ56 Gm26126-201ENSMUST00000083188 164 ntBASIC1.66□□□□□ -2.14
Use1Q9CQ56 Gm26175-201ENSMUST00000083794 131 ntBASIC1.66□□□□□ -2.14
Use1Q9CQ56 Gm10360-201ENSMUST00000097219 272 ntBASIC1.66□□□□□ -2.14
Use1Q9CQ56 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.66□□□□□ -2.14
Use1Q9CQ56 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.14
Use1Q9CQ56 Gm24910-201ENSMUST00000157289 272 ntBASIC1.65□□□□□ -2.15
Use1Q9CQ56 Gm23391-201ENSMUST00000157579 104 ntBASIC1.65□□□□□ -2.15
Use1Q9CQ56 Gm25012-201ENSMUST00000158396 164 ntBASIC1.65□□□□□ -2.15
Use1Q9CQ56 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.15
Use1Q9CQ56 Mir28b-201ENSMUST00000175399 80 ntBASIC1.65□□□□□ -2.15
Use1Q9CQ56 Gm29950-201ENSMUST00000195273 237 ntBASIC1.65□□□□□ -2.15
Use1Q9CQ56 Gm43680-201ENSMUST00000199466 340 ntBASIC1.65□□□□□ -2.15
Use1Q9CQ56 Gm44881-201ENSMUST00000205425 367 ntBASIC1.65□□□□□ -2.15
Use1Q9CQ56 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Use1Q9CQ56 Gm25813-201ENSMUST00000082748 191 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms