Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm19123-201ENSMUST00000190716 651 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.32□□□□□ -1.88
Clrn1Q8K445 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Gm25592-201ENSMUST00000082635 131 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Gm24152-201ENSMUST00000082764 163 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Clrn1Q8K445 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Clrn1Q8K445 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Clrn1Q8K445 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Clrn1Q8K445 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Clrn1Q8K445 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Clrn1Q8K445 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
Clrn1Q8K445 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
Clrn1Q8K445 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Clrn1Q8K445 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Clrn1Q8K445 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Clrn1Q8K445 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.31□□□□□ -1.88
Clrn1Q8K445 Gm23602-201ENSMUST00000157258 132 ntBASIC3.31□□□□□ -1.88
Clrn1Q8K445 Gm24998-201ENSMUST00000157908 89 ntBASIC3.31□□□□□ -1.88
Clrn1Q8K445 Gm24726-201ENSMUST00000158232 121 ntBASIC3.31□□□□□ -1.88
Clrn1Q8K445 Gm29014-201ENSMUST00000191422 326 ntBASIC3.31□□□□□ -1.88
Clrn1Q8K445 Gm44322-201ENSMUST00000196830 115 ntBASIC3.31□□□□□ -1.88
Clrn1Q8K445 Snord47-201ENSMUST00000083034 77 ntBASIC3.31□□□□□ -1.88
Clrn1Q8K445 Gm22973-201ENSMUST00000083298 191 ntBASIC3.31□□□□□ -1.88
Clrn1Q8K445 Mir181b-2-201ENSMUST00000083644 89 ntBASIC3.31□□□□□ -1.88
Clrn1Q8K445 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Clrn1Q8K445 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Clrn1Q8K445 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Clrn1Q8K445 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm26145-201ENSMUST00000104476 127 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm15846-201ENSMUST00000116022 320 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm15162-201ENSMUST00000119325 283 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm13992-201ENSMUST00000120558 156 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm22482-201ENSMUST00000122563 359 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm22027-201ENSMUST00000122737 127 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm23957-201ENSMUST00000157209 90 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm22034-201ENSMUST00000157283 134 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm24750-201ENSMUST00000157843 104 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm25654-201ENSMUST00000158467 88 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Mir6385-201ENSMUST00000184295 105 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm28030-201ENSMUST00000184987 138 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm28848-201ENSMUST00000189984 168 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.3□□□□□ -1.88
Clrn1Q8K445 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm44533-201ENSMUST00000207782 268 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm44594-201ENSMUST00000208982 407 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.3□□□□□ -1.88
Clrn1Q8K445 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.3□□□□□ -1.88
Clrn1Q8K445 AC173482.5-201ENSMUST00000224181 327 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 AC100209.2-201ENSMUST00000224461 451 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm10092-201ENSMUST00000077110 180 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm22294-201ENSMUST00000083308 104 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm23850-201ENSMUST00000083830 169 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Clrn1Q8K445 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.3□□□□□ -1.88
Clrn1Q8K445 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.3□□□□□ -1.88
Clrn1Q8K445 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Clrn1Q8K445 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Clrn1Q8K445 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Clrn1Q8K445 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Clrn1Q8K445 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Clrn1Q8K445 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Clrn1Q8K445 Mir872-201ENSMUST00000104728 81 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 Gm12797-201ENSMUST00000118645 273 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 Gm22321-201ENSMUST00000157152 104 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 Gm22560-201ENSMUST00000157332 120 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 Gm25720-201ENSMUST00000157503 105 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 Gm24505-201ENSMUST00000157682 126 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 Gm2962-201ENSMUST00000159266 336 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 Gm22450-201ENSMUST00000179641 107 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 Gm25473-201ENSMUST00000180191 107 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 Gm34779-201ENSMUST00000210036 263 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 Gm10298-201ENSMUST00000074801 265 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 Gm25930-201ENSMUST00000082785 107 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 Gm24856-201ENSMUST00000082809 107 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 Gm23678-201ENSMUST00000083157 107 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 Gm26071-201ENSMUST00000083261 107 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 Gm23461-201ENSMUST00000083265 107 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 Gm25581-201ENSMUST00000083410 164 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 Mir323-201ENSMUST00000083683 86 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 Gm24521-201ENSMUST00000083958 107 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Clrn1Q8K445 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Clrn1Q8K445 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Clrn1Q8K445 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.29□□□□□ -1.88
Clrn1Q8K445 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Clrn1Q8K445 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.28□□□□□ -1.88
Clrn1Q8K445 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms