Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CopaQ8CIE6 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CopaQ8CIE6 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CopaQ8CIE6 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gm23747-201ENSMUST00000104228 131 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gm25539-201ENSMUST00000116886 122 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gm13355-201ENSMUST00000117996 317 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gm11606-201ENSMUST00000120706 617 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gm25325-201ENSMUST00000122559 86 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gm22479-201ENSMUST00000122566 81 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gm23713-201ENSMUST00000157353 70 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gm22615-201ENSMUST00000158102 70 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gm25397-201ENSMUST00000176951 92 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gm22131-201ENSMUST00000178415 94 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CopaQ8CIE6 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gm37361-201ENSMUST00000194345 132 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gm43035-201ENSMUST00000197626 517 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gm43406-201ENSMUST00000200356 334 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 AC122225.1-201ENSMUST00000215641 369 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Olfr197-201ENSMUST00000080031 926 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gm22806-201ENSMUST00000082738 136 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gm22353-201ENSMUST00000083918 136 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gm650-201ENSMUST00000144428 1551 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 AC122887.2-201ENSMUST00000219465 1603 ntBASIC3.15□□□□□ -1.91
CopaQ8CIE6 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CopaQ8CIE6 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CopaQ8CIE6 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CopaQ8CIE6 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CopaQ8CIE6 Gm36989-201ENSMUST00000193225 2160 ntBASIC3.14□□□□□ -1.91
CopaQ8CIE6 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CopaQ8CIE6 Gm14448-201ENSMUST00000116383 210 ntBASIC3.14□□□□□ -1.91
CopaQ8CIE6 Gm11322-201ENSMUST00000118095 435 ntBASIC3.14□□□□□ -1.91
CopaQ8CIE6 Gm24481-201ENSMUST00000157210 102 ntBASIC3.14□□□□□ -1.91
CopaQ8CIE6 Gm23559-201ENSMUST00000157824 103 ntBASIC3.14□□□□□ -1.91
CopaQ8CIE6 Gm32033-201ENSMUST00000193483 339 ntBASIC3.14□□□□□ -1.91
CopaQ8CIE6 Gm44373-201ENSMUST00000196112 169 ntBASIC3.14□□□□□ -1.91
CopaQ8CIE6 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.14□□□□□ -1.91
CopaQ8CIE6 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.14□□□□□ -1.91
CopaQ8CIE6 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.14□□□□□ -1.91
CopaQ8CIE6 AC164297.3-201ENSMUST00000224238 94 ntBASIC3.14□□□□□ -1.91
CopaQ8CIE6 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.14□□□□□ -1.91
CopaQ8CIE6 Gm10298-201ENSMUST00000074801 265 ntBASIC3.14□□□□□ -1.91
CopaQ8CIE6 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CopaQ8CIE6 Gm23851-201ENSMUST00000083831 103 ntBASIC3.14□□□□□ -1.91
CopaQ8CIE6 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CopaQ8CIE6 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
CopaQ8CIE6 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.14□□□□□ -1.91
CopaQ8CIE6 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CopaQ8CIE6 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CopaQ8CIE6 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CopaQ8CIE6 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CopaQ8CIE6 Gm12876-201ENSMUST00000120975 408 ntBASIC3.13□□□□□ -1.91
CopaQ8CIE6 Gm12155-201ENSMUST00000121267 160 ntBASIC3.13□□□□□ -1.91
CopaQ8CIE6 Gm6956-201ENSMUST00000134724 546 ntBASIC3.13□□□□□ -1.91
CopaQ8CIE6 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CopaQ8CIE6 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CopaQ8CIE6 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CopaQ8CIE6 Gm17522-201ENSMUST00000178144 498 ntBASIC3.13□□□□□ -1.91
CopaQ8CIE6 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CopaQ8CIE6 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CopaQ8CIE6 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CopaQ8CIE6 Gm6660-201ENSMUST00000179149 468 ntBASIC3.13□□□□□ -1.91
CopaQ8CIE6 Gm28825-201ENSMUST00000186233 238 ntBASIC3.13□□□□□ -1.91
CopaQ8CIE6 Gm28534-201ENSMUST00000187744 676 ntBASIC3.13□□□□□ -1.91
CopaQ8CIE6 Gm28358-202ENSMUST00000189292 223 ntBASIC3.13□□□□□ -1.91
CopaQ8CIE6 Gm23370-202ENSMUST00000197008 129 ntBASIC3.13□□□□□ -1.91
CopaQ8CIE6 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.13□□□□□ -1.91
CopaQ8CIE6 Gm44063-201ENSMUST00000203307 376 ntBASIC3.13□□□□□ -1.91
CopaQ8CIE6 Gm44425-201ENSMUST00000203739 429 ntBASIC3.13□□□□□ -1.91
CopaQ8CIE6 Gm44844-201ENSMUST00000207242 336 ntBASIC3.13□□□□□ -1.91
CopaQ8CIE6 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.13□□□□□ -1.91
CopaQ8CIE6 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.13□□□□□ -1.91
CopaQ8CIE6 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CopaQ8CIE6 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CopaQ8CIE6 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CopaQ8CIE6 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CopaQ8CIE6 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC3.12□□□□□ -1.91
CopaQ8CIE6 Gm13518-201ENSMUST00000120018 233 ntBASIC3.12□□□□□ -1.91
CopaQ8CIE6 Gm13396-201ENSMUST00000120617 271 ntBASIC3.12□□□□□ -1.91
CopaQ8CIE6 Gm13443-201ENSMUST00000120770 555 ntBASIC3.12□□□□□ -1.91
CopaQ8CIE6 Gm16362-201ENSMUST00000135189 214 ntBASIC3.12□□□□□ -1.91
CopaQ8CIE6 Gm16358-201ENSMUST00000146046 210 ntBASIC3.12□□□□□ -1.91
CopaQ8CIE6 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.12□□□□□ -1.91
CopaQ8CIE6 Gm22322-201ENSMUST00000157151 111 ntBASIC3.12□□□□□ -1.91
CopaQ8CIE6 Gm22843-201ENSMUST00000157710 134 ntBASIC3.12□□□□□ -1.91
CopaQ8CIE6 Gm24213-201ENSMUST00000158255 258 ntBASIC3.12□□□□□ -1.91
CopaQ8CIE6 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CopaQ8CIE6 Gm27410-201ENSMUST00000183851 115 ntBASIC3.12□□□□□ -1.91
CopaQ8CIE6 Gm27470-201ENSMUST00000184070 210 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms