Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm5034-201ENSMUST00000199115 634 ntBASIC2.8□□□□□ -1.96
Nup88Q8CEC0 Gm44161-201ENSMUST00000203532 253 ntBASIC2.8□□□□□ -1.96
Nup88Q8CEC0 Gm29809-201ENSMUST00000218423 493 ntBASIC2.8□□□□□ -1.96
Nup88Q8CEC0 AC131720.2-201ENSMUST00000220420 431 ntBASIC2.8□□□□□ -1.96
Nup88Q8CEC0 Gm46312-201ENSMUST00000220961 420 ntBASIC2.8□□□□□ -1.96
Nup88Q8CEC0 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.8□□□□□ -1.96
Nup88Q8CEC0 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.8□□□□□ -1.96
Nup88Q8CEC0 Gm23517-201ENSMUST00000082830 192 ntBASIC2.8□□□□□ -1.96
Nup88Q8CEC0 Gm25199-201ENSMUST00000083095 104 ntBASIC2.8□□□□□ -1.96
Nup88Q8CEC0 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.8□□□□□ -1.96
Nup88Q8CEC0 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Nup88Q8CEC0 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Nup88Q8CEC0 Gm22270-201ENSMUST00000104034 132 ntBASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Mir743b-201ENSMUST00000104751 77 ntBASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Gm15497-201ENSMUST00000119137 551 ntBASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Gm13475-201ENSMUST00000119290 234 ntBASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Gm13409-201ENSMUST00000122072 546 ntBASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Gm25325-201ENSMUST00000122559 86 ntBASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Gm23016-201ENSMUST00000158431 62 ntBASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Gm25314-201ENSMUST00000178810 79 ntBASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Gm6660-201ENSMUST00000179149 468 ntBASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Gm27220-201ENSMUST00000183453 262 ntBASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Gm29553-201ENSMUST00000189692 279 ntBASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Gm43286-201ENSMUST00000197420 424 ntBASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Gm43193-201ENSMUST00000197732 441 ntBASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Gm44478-201ENSMUST00000204875 114 ntBASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Gm45522-201ENSMUST00000210784 166 ntBASIC2.79□□□□□ -1.96
Nup88Q8CEC0 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.79□□□□□ -1.96
Nup88Q8CEC0 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Gm13728-201ENSMUST00000117471 400 ntBASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Gm15183-201ENSMUST00000118933 348 ntBASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Gm12443-201ENSMUST00000122308 323 ntBASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Gm23184-201ENSMUST00000122594 131 ntBASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Gm26278-201ENSMUST00000157098 132 ntBASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Mir1942-201ENSMUST00000157274 63 ntBASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Gm26406-201ENSMUST00000158503 124 ntBASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Gm22947-201ENSMUST00000158559 91 ntBASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Gm21754-201ENSMUST00000177550 479 ntBASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Gm29231-201ENSMUST00000179850 319 ntBASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Gm44465-201ENSMUST00000199536 114 ntBASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Gm45402-201ENSMUST00000211796 223 ntBASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Gm8940-201ENSMUST00000212585 219 ntBASIC2.78□□□□□ -1.96
Nup88Q8CEC0 AC166358.10-201ENSMUST00000220556 144 ntBASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Gm5374-201ENSMUST00000222868 657 ntBASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Gm25628-201ENSMUST00000084002 105 ntBASIC2.78□□□□□ -1.96
Nup88Q8CEC0 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Nup88Q8CEC0 Gm13913-201ENSMUST00000121126 260 ntBASIC2.77□□□□□ -1.97
Nup88Q8CEC0 Gm7209-201ENSMUST00000122339 333 ntBASIC2.77□□□□□ -1.97
Nup88Q8CEC0 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.77□□□□□ -1.97
Nup88Q8CEC0 Gm23000-201ENSMUST00000157083 139 ntBASIC2.77□□□□□ -1.97
Nup88Q8CEC0 Gm23642-201ENSMUST00000157858 258 ntBASIC2.77□□□□□ -1.97
Nup88Q8CEC0 Gm24862-201ENSMUST00000179103 79 ntBASIC2.77□□□□□ -1.97
Nup88Q8CEC0 Gm23310-201ENSMUST00000179105 79 ntBASIC2.77□□□□□ -1.97
Nup88Q8CEC0 Gm25461-201ENSMUST00000179293 79 ntBASIC2.77□□□□□ -1.97
Nup88Q8CEC0 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.77□□□□□ -1.97
Nup88Q8CEC0 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Nup88Q8CEC0 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Nup88Q8CEC0 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.77□□□□□ -1.97
Nup88Q8CEC0 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Nup88Q8CEC0 Gm24582-201ENSMUST00000103967 103 ntBASIC2.76□□□□□ -1.97
Nup88Q8CEC0 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.76□□□□□ -1.97
Nup88Q8CEC0 Gm13880-201ENSMUST00000118421 474 ntBASIC2.76□□□□□ -1.97
Nup88Q8CEC0 Gm12871-201ENSMUST00000118758 438 ntBASIC2.76□□□□□ -1.97
Nup88Q8CEC0 Gm11512-201ENSMUST00000119669 663 ntBASIC2.76□□□□□ -1.97
Nup88Q8CEC0 Gm12872-201ENSMUST00000121835 320 ntBASIC2.76□□□□□ -1.97
Nup88Q8CEC0 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.76□□□□□ -1.97
Nup88Q8CEC0 Gm17065-201ENSMUST00000165245 239 ntBASIC2.76□□□□□ -1.97
Nup88Q8CEC0 Gm26430-201ENSMUST00000178054 107 ntBASIC2.76□□□□□ -1.97
Nup88Q8CEC0 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.76□□□□□ -1.97
Nup88Q8CEC0 Gm43007-201ENSMUST00000197618 291 ntBASIC2.76□□□□□ -1.97
Nup88Q8CEC0 Gm43600-201ENSMUST00000202134 223 ntBASIC2.76□□□□□ -1.97
Nup88Q8CEC0 Gm44459-201ENSMUST00000203926 160 ntBASIC2.76□□□□□ -1.97
Nup88Q8CEC0 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.76□□□□□ -1.97
Nup88Q8CEC0 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC2.76□□□□□ -1.97
Nup88Q8CEC0 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Nup88Q8CEC0 AC124772.1-201ENSMUST00000221325 151 ntBASIC2.76□□□□□ -1.97
Nup88Q8CEC0 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Nup88Q8CEC0 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Nup88Q8CEC0 Olfr197-201ENSMUST00000080031 926 ntBASIC2.76□□□□□ -1.97
Nup88Q8CEC0 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Nup88Q8CEC0 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Nup88Q8CEC0 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Nup88Q8CEC0 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Nup88Q8CEC0 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Nup88Q8CEC0 Gm12697-201ENSMUST00000118008 667 ntBASIC2.75□□□□□ -1.97
Nup88Q8CEC0 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Nup88Q8CEC0 Gm24056-201ENSMUST00000158617 146 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms