Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm25994-201ENSMUST00000175392 101 ntBASIC1.38□□□□□ -2.19
Trub1Q8C0D0 Gm21737-201ENSMUST00000178112 664 ntBASIC1.38□□□□□ -2.19
Trub1Q8C0D0 Gm21729-201ENSMUST00000180058 664 ntBASIC1.38□□□□□ -2.19
Trub1Q8C0D0 Gm21853-201ENSMUST00000180071 664 ntBASIC1.38□□□□□ -2.19
Trub1Q8C0D0 Gm20901-201ENSMUST00000180177 664 ntBASIC1.38□□□□□ -2.19
Trub1Q8C0D0 Gm29073-201ENSMUST00000185563 664 ntBASIC1.38□□□□□ -2.19
Trub1Q8C0D0 Gm29495-201ENSMUST00000189319 664 ntBASIC1.38□□□□□ -2.19
Trub1Q8C0D0 Gm28090-201ENSMUST00000189458 664 ntBASIC1.38□□□□□ -2.19
Trub1Q8C0D0 Gm21647-201ENSMUST00000189755 664 ntBASIC1.38□□□□□ -2.19
Trub1Q8C0D0 Gm29165-201ENSMUST00000190655 664 ntBASIC1.38□□□□□ -2.19
Trub1Q8C0D0 Gm29211-201ENSMUST00000191470 664 ntBASIC1.38□□□□□ -2.19
Trub1Q8C0D0 Gm36891-201ENSMUST00000191995 655 ntBASIC1.38□□□□□ -2.19
Trub1Q8C0D0 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC1.38□□□□□ -2.19
Trub1Q8C0D0 Gm38268-201ENSMUST00000195813 193 ntBASIC1.38□□□□□ -2.19
Trub1Q8C0D0 Gm9236-201ENSMUST00000196892 587 ntBASIC1.38□□□□□ -2.19
Trub1Q8C0D0 Gm45240-201ENSMUST00000211437 674 ntBASIC1.38□□□□□ -2.19
Trub1Q8C0D0 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
Trub1Q8C0D0 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC1.38□□□□□ -2.19
Trub1Q8C0D0 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.38□□□□□ -2.19
Trub1Q8C0D0 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.38□□□□□ -2.19
Trub1Q8C0D0 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.38□□□□□ -2.19
Trub1Q8C0D0 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Trub1Q8C0D0 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Trub1Q8C0D0 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.38□□□□□ -2.19
Trub1Q8C0D0 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Gm14558-201ENSMUST00000117458 381 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Gm15175-201ENSMUST00000117629 132 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Gm15211-201ENSMUST00000118932 528 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Gm12507-201ENSMUST00000119155 415 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Gm12309-201ENSMUST00000119889 182 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Gm15167-201ENSMUST00000121997 187 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Gm24839-201ENSMUST00000122602 107 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Gm26049-201ENSMUST00000157313 108 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Gm23078-201ENSMUST00000157848 148 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Gm29550-201ENSMUST00000185543 285 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Gm43723-201ENSMUST00000196886 189 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Gm43676-201ENSMUST00000197532 540 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 AC122341.1-201ENSMUST00000227291 560 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Gm6369-201ENSMUST00000069626 412 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Gm23454-201ENSMUST00000083332 133 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Mir151-201ENSMUST00000083678 68 ntBASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Trub1Q8C0D0 Gm25088-201ENSMUST00000101803 79 ntBASIC1.36□□□□□ -2.19
Trub1Q8C0D0 Mir301b-201ENSMUST00000102333 97 ntBASIC1.36□□□□□ -2.19
Trub1Q8C0D0 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Trub1Q8C0D0 Gm22556-201ENSMUST00000157803 100 ntBASIC1.36□□□□□ -2.19
Trub1Q8C0D0 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.36□□□□□ -2.19
Trub1Q8C0D0 Gm17154-201ENSMUST00000165748 431 ntBASIC1.36□□□□□ -2.19
Trub1Q8C0D0 Gm25243-201ENSMUST00000174912 207 ntBASIC1.36□□□□□ -2.19
Trub1Q8C0D0 Gm25020-201ENSMUST00000178071 107 ntBASIC1.36□□□□□ -2.19
Trub1Q8C0D0 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.36□□□□□ -2.19
Trub1Q8C0D0 Gm44384-201ENSMUST00000200208 114 ntBASIC1.36□□□□□ -2.19
Trub1Q8C0D0 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Trub1Q8C0D0 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.36□□□□□ -2.19
Trub1Q8C0D0 Gm18691-201ENSMUST00000203593 872 ntBASIC1.36□□□□□ -2.19
Trub1Q8C0D0 Gm44954-201ENSMUST00000208513 227 ntBASIC1.36□□□□□ -2.19
Trub1Q8C0D0 Gm46103-201ENSMUST00000217614 341 ntBASIC1.36□□□□□ -2.19
Trub1Q8C0D0 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.36□□□□□ -2.19
Trub1Q8C0D0 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.36□□□□□ -2.19
Trub1Q8C0D0 AC134335.1-201ENSMUST00000227626 329 ntBASIC1.36□□□□□ -2.19
Trub1Q8C0D0 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.35□□□□□ -2.19
Trub1Q8C0D0 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Trub1Q8C0D0 Gm14674-201ENSMUST00000117816 342 ntBASIC1.35□□□□□ -2.19
Trub1Q8C0D0 Gm15878-201ENSMUST00000127561 306 ntBASIC1.35□□□□□ -2.19
Trub1Q8C0D0 Gm23172-201ENSMUST00000157160 124 ntBASIC1.35□□□□□ -2.19
Trub1Q8C0D0 Gm23230-201ENSMUST00000157298 133 ntBASIC1.35□□□□□ -2.19
Trub1Q8C0D0 Mir1949-201ENSMUST00000157434 141 ntBASIC1.35□□□□□ -2.19
Trub1Q8C0D0 Snord13-201ENSMUST00000157627 104 ntBASIC1.35□□□□□ -2.19
Trub1Q8C0D0 Gm23381-201ENSMUST00000157676 94 ntBASIC1.35□□□□□ -2.19
Trub1Q8C0D0 Gm3221-201ENSMUST00000164869 440 ntBASIC1.35□□□□□ -2.19
Trub1Q8C0D0 Gm8114-201ENSMUST00000172225 484 ntBASIC1.35□□□□□ -2.19
Trub1Q8C0D0 Mir3068-202ENSMUST00000197755 79 ntBASIC1.35□□□□□ -2.19
Trub1Q8C0D0 Gm45071-201ENSMUST00000205353 571 ntBASIC1.35□□□□□ -2.19
Trub1Q8C0D0 Olfr1285-201ENSMUST00000208523 903 ntBASIC1.35□□□□□ -2.19
Trub1Q8C0D0 Gm45730-201ENSMUST00000212560 395 ntBASIC1.35□□□□□ -2.19
Trub1Q8C0D0 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC1.35□□□□□ -2.19
Trub1Q8C0D0 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.35□□□□□ -2.19
Trub1Q8C0D0 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC1.35□□□□□ -2.19
Trub1Q8C0D0 Gm23517-201ENSMUST00000082830 192 ntBASIC1.35□□□□□ -2.19
Trub1Q8C0D0 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.34□□□□□ -2.19
Trub1Q8C0D0 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Trub1Q8C0D0 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Trub1Q8C0D0 Gm13378-201ENSMUST00000117483 336 ntBASIC1.34□□□□□ -2.19
Trub1Q8C0D0 Gm15090-201ENSMUST00000118787 1196 ntBASIC1.34□□□□□ -2.19
Trub1Q8C0D0 Gm15089-201ENSMUST00000122332 1196 ntBASIC1.34□□□□□ -2.19
Trub1Q8C0D0 Gm23118-201ENSMUST00000122657 187 ntBASIC1.34□□□□□ -2.19
Trub1Q8C0D0 Gm24837-201ENSMUST00000158683 81 ntBASIC1.34□□□□□ -2.19
Trub1Q8C0D0 Gm25365-201ENSMUST00000158852 121 ntBASIC1.34□□□□□ -2.19
Trub1Q8C0D0 Gm24111-201ENSMUST00000175491 97 ntBASIC1.34□□□□□ -2.19
Trub1Q8C0D0 Gm24464-201ENSMUST00000179697 107 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 130.4 ms