Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.34□□□□□ -1.71
Usp40Q8BWR4 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Usp40Q8BWR4 Gm6462-201ENSMUST00000081488 304 ntBASIC4.34□□□□□ -1.71
Usp40Q8BWR4 Gm25755-201ENSMUST00000083396 107 ntBASIC4.34□□□□□ -1.71
Usp40Q8BWR4 Gm25581-201ENSMUST00000083410 164 ntBASIC4.34□□□□□ -1.71
Usp40Q8BWR4 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Usp40Q8BWR4 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Usp40Q8BWR4 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Usp40Q8BWR4 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.33□□□□□ -1.72
Usp40Q8BWR4 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Usp40Q8BWR4 Gm15846-201ENSMUST00000116022 320 ntBASIC4.33□□□□□ -1.72
Usp40Q8BWR4 Gm13714-201ENSMUST00000117313 221 ntBASIC4.33□□□□□ -1.72
Usp40Q8BWR4 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.33□□□□□ -1.72
Usp40Q8BWR4 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.33□□□□□ -1.72
Usp40Q8BWR4 Gm25599-201ENSMUST00000157816 103 ntBASIC4.33□□□□□ -1.72
Usp40Q8BWR4 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Usp40Q8BWR4 Gm27285-201ENSMUST00000183875 127 ntBASIC4.33□□□□□ -1.72
Usp40Q8BWR4 Mir6914-201ENSMUST00000184999 69 ntBASIC4.33□□□□□ -1.72
Usp40Q8BWR4 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.33□□□□□ -1.72
Usp40Q8BWR4 Gm36189-201ENSMUST00000204113 523 ntBASIC4.33□□□□□ -1.72
Usp40Q8BWR4 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC4.33□□□□□ -1.72
Usp40Q8BWR4 Gm44446-201ENSMUST00000204864 255 ntBASIC4.33□□□□□ -1.72
Usp40Q8BWR4 Gm44881-201ENSMUST00000205425 367 ntBASIC4.33□□□□□ -1.72
Usp40Q8BWR4 Gm6796-201ENSMUST00000211919 243 ntBASIC4.33□□□□□ -1.72
Usp40Q8BWR4 CT030247.1-201ENSMUST00000216810 267 ntBASIC4.33□□□□□ -1.72
Usp40Q8BWR4 AC154282.1-201ENSMUST00000223154 265 ntBASIC4.33□□□□□ -1.72
Usp40Q8BWR4 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.33□□□□□ -1.72
Usp40Q8BWR4 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.33□□□□□ -1.72
Usp40Q8BWR4 AC172751.1-201ENSMUST00000226887 440 ntBASIC4.33□□□□□ -1.72
Usp40Q8BWR4 Gm9795-201ENSMUST00000062156 693 ntBASIC4.33□□□□□ -1.72
Usp40Q8BWR4 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Usp40Q8BWR4 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Usp40Q8BWR4 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Usp40Q8BWR4 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.32□□□□□ -1.72
Usp40Q8BWR4 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.32□□□□□ -1.72
Usp40Q8BWR4 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Usp40Q8BWR4 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Usp40Q8BWR4 Gm14657-201ENSMUST00000117461 302 ntBASIC4.32□□□□□ -1.72
Usp40Q8BWR4 Gm12797-201ENSMUST00000118645 273 ntBASIC4.32□□□□□ -1.72
Usp40Q8BWR4 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.32□□□□□ -1.72
Usp40Q8BWR4 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC4.32□□□□□ -1.72
Usp40Q8BWR4 Gm24787-201ENSMUST00000157380 123 ntBASIC4.32□□□□□ -1.72
Usp40Q8BWR4 Gm26088-201ENSMUST00000157896 131 ntBASIC4.32□□□□□ -1.72
Usp40Q8BWR4 Gm24487-201ENSMUST00000178017 63 ntBASIC4.32□□□□□ -1.72
Usp40Q8BWR4 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC4.32□□□□□ -1.72
Usp40Q8BWR4 Gm44092-201ENSMUST00000204470 258 ntBASIC4.32□□□□□ -1.72
Usp40Q8BWR4 Gm5002-201ENSMUST00000207145 223 ntBASIC4.32□□□□□ -1.72
Usp40Q8BWR4 Gm18188-201ENSMUST00000219386 478 ntBASIC4.32□□□□□ -1.72
Usp40Q8BWR4 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC4.32□□□□□ -1.72
Usp40Q8BWR4 AC154603.1-201ENSMUST00000224355 313 ntBASIC4.32□□□□□ -1.72
Usp40Q8BWR4 AC124746.2-201ENSMUST00000226594 427 ntBASIC4.32□□□□□ -1.72
Usp40Q8BWR4 Gm10813-201ENSMUST00000099936 90 ntBASIC4.32□□□□□ -1.72
Usp40Q8BWR4 Gm14387-201ENSMUST00000121827 2055 ntBASIC4.32□□□□□ -1.72
Usp40Q8BWR4 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Usp40Q8BWR4 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Usp40Q8BWR4 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Usp40Q8BWR4 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.31□□□□□ -1.72
Usp40Q8BWR4 AC115047.2-201ENSMUST00000214421 1848 ntBASIC4.31□□□□□ -1.72
Usp40Q8BWR4 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Usp40Q8BWR4 Gm14537-201ENSMUST00000117464 599 ntBASIC4.31□□□□□ -1.72
Usp40Q8BWR4 Gm26479-201ENSMUST00000122620 106 ntBASIC4.31□□□□□ -1.72
Usp40Q8BWR4 Gm22984-201ENSMUST00000122751 122 ntBASIC4.31□□□□□ -1.72
Usp40Q8BWR4 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.31□□□□□ -1.72
Usp40Q8BWR4 Gm25015-201ENSMUST00000158400 128 ntBASIC4.31□□□□□ -1.72
Usp40Q8BWR4 Gm27308-201ENSMUST00000184807 233 ntBASIC4.31□□□□□ -1.72
Usp40Q8BWR4 Gm29330-201ENSMUST00000190032 699 ntBASIC4.31□□□□□ -1.72
Usp40Q8BWR4 Gm24350-202ENSMUST00000198309 132 ntBASIC4.31□□□□□ -1.72
Usp40Q8BWR4 Gm45772-201ENSMUST00000212961 240 ntBASIC4.31□□□□□ -1.72
Usp40Q8BWR4 AC159896.1-201ENSMUST00000215264 215 ntBASIC4.31□□□□□ -1.72
Usp40Q8BWR4 AC153864.2-201ENSMUST00000220424 292 ntBASIC4.31□□□□□ -1.72
Usp40Q8BWR4 AC154276.2-201ENSMUST00000227707 309 ntBASIC4.31□□□□□ -1.72
Usp40Q8BWR4 Gm24817-201ENSMUST00000093672 105 ntBASIC4.31□□□□□ -1.72
Usp40Q8BWR4 Gm23741-201ENSMUST00000097237 171 ntBASIC4.31□□□□□ -1.72
Usp40Q8BWR4 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.31□□□□□ -1.72
Usp40Q8BWR4 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Usp40Q8BWR4 Gm42801-201ENSMUST00000202562 2865 ntBASIC4.31□□□□□ -1.72
Usp40Q8BWR4 Gm45557-201ENSMUST00000210004 1651 ntBASIC4.3□□□□□ -1.72
Usp40Q8BWR4 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Usp40Q8BWR4 Gm27510-201ENSMUST00000158214 64 ntBASIC4.3□□□□□ -1.72
Usp40Q8BWR4 Gm29602-201ENSMUST00000186887 442 ntBASIC4.3□□□□□ -1.72
Usp40Q8BWR4 Gm19123-201ENSMUST00000190716 651 ntBASIC4.3□□□□□ -1.72
Usp40Q8BWR4 Gm28552-201ENSMUST00000190725 388 ntBASIC4.3□□□□□ -1.72
Usp40Q8BWR4 Gm42855-201ENSMUST00000197388 253 ntBASIC4.3□□□□□ -1.72
Usp40Q8BWR4 Gm18341-201ENSMUST00000197538 622 ntBASIC4.3□□□□□ -1.72
Usp40Q8BWR4 Gm43746-201ENSMUST00000200028 317 ntBASIC4.3□□□□□ -1.72
Usp40Q8BWR4 Gm43284-201ENSMUST00000200103 253 ntBASIC4.3□□□□□ -1.72
Usp40Q8BWR4 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC4.3□□□□□ -1.72
Usp40Q8BWR4 Gm30534-201ENSMUST00000217928 207 ntBASIC4.3□□□□□ -1.72
Usp40Q8BWR4 AC130821.1-201ENSMUST00000221997 293 ntBASIC4.3□□□□□ -1.72
Usp40Q8BWR4 AC124182.1-201ENSMUST00000227091 321 ntBASIC4.3□□□□□ -1.72
Usp40Q8BWR4 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Usp40Q8BWR4 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Usp40Q8BWR4 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.3□□□□□ -1.72
Usp40Q8BWR4 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Usp40Q8BWR4 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Usp40Q8BWR4 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Gm15148-201ENSMUST00000117602 156 ntBASIC4.29□□□□□ -1.72
Usp40Q8BWR4 Gm16242-201ENSMUST00000117741 334 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms