Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Snord43-201ENSMUST00000199549 108 ntBASIC2.17□□□□□ -2.06
Ccdc40Q8BI79 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.17□□□□□ -2.06
Ccdc40Q8BI79 Gm9377-201ENSMUST00000207227 623 ntBASIC2.17□□□□□ -2.06
Ccdc40Q8BI79 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Ccdc40Q8BI79 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.17□□□□□ -2.06
Ccdc40Q8BI79 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.16□□□□□ -2.06
Ccdc40Q8BI79 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Ccdc40Q8BI79 Gm22591-201ENSMUST00000104243 106 ntBASIC2.16□□□□□ -2.06
Ccdc40Q8BI79 Mir3096-201ENSMUST00000116685 71 ntBASIC2.16□□□□□ -2.06
Ccdc40Q8BI79 Gm12370-201ENSMUST00000117809 604 ntBASIC2.16□□□□□ -2.06
Ccdc40Q8BI79 Gm12304-201ENSMUST00000120312 385 ntBASIC2.16□□□□□ -2.06
Ccdc40Q8BI79 Gm25113-201ENSMUST00000157185 143 ntBASIC2.16□□□□□ -2.06
Ccdc40Q8BI79 Gm24885-201ENSMUST00000158783 270 ntBASIC2.16□□□□□ -2.06
Ccdc40Q8BI79 Gm26157-201ENSMUST00000158974 126 ntBASIC2.16□□□□□ -2.06
Ccdc40Q8BI79 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC2.16□□□□□ -2.06
Ccdc40Q8BI79 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.16□□□□□ -2.06
Ccdc40Q8BI79 Gm9022-202ENSMUST00000183285 483 ntBASIC2.16□□□□□ -2.06
Ccdc40Q8BI79 Gm29550-201ENSMUST00000185543 285 ntBASIC2.16□□□□□ -2.06
Ccdc40Q8BI79 Gm2719-201ENSMUST00000191929 444 ntBASIC2.16□□□□□ -2.06
Ccdc40Q8BI79 Gm43680-201ENSMUST00000199466 340 ntBASIC2.16□□□□□ -2.06
Ccdc40Q8BI79 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.16□□□□□ -2.06
Ccdc40Q8BI79 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.16□□□□□ -2.06
Ccdc40Q8BI79 Gm22978-201ENSMUST00000082607 160 ntBASIC2.16□□□□□ -2.06
Ccdc40Q8BI79 Gm12393-201ENSMUST00000117084 848 ntBASIC2.15□□□□□ -2.07
Ccdc40Q8BI79 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Ccdc40Q8BI79 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC2.15□□□□□ -2.07
Ccdc40Q8BI79 Gm15692-201ENSMUST00000152173 352 ntBASIC2.15□□□□□ -2.07
Ccdc40Q8BI79 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.15□□□□□ -2.07
Ccdc40Q8BI79 Gm24518-201ENSMUST00000180275 94 ntBASIC2.15□□□□□ -2.07
Ccdc40Q8BI79 Gm26622-201ENSMUST00000180520 298 ntBASIC2.15□□□□□ -2.07
Ccdc40Q8BI79 Gm27878-201ENSMUST00000184000 106 ntBASIC2.15□□□□□ -2.07
Ccdc40Q8BI79 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.15□□□□□ -2.07
Ccdc40Q8BI79 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Ccdc40Q8BI79 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.15□□□□□ -2.07
Ccdc40Q8BI79 Gm44923-201ENSMUST00000206673 85 ntBASIC2.15□□□□□ -2.07
Ccdc40Q8BI79 Gm2628-201ENSMUST00000218019 426 ntBASIC2.15□□□□□ -2.07
Ccdc40Q8BI79 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.15□□□□□ -2.07
Ccdc40Q8BI79 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.15□□□□□ -2.07
Ccdc40Q8BI79 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.15□□□□□ -2.07
Ccdc40Q8BI79 Mir107-201ENSMUST00000083660 87 ntBASIC2.15□□□□□ -2.07
Ccdc40Q8BI79 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Gm14793-201ENSMUST00000118739 311 ntBASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Gm13409-201ENSMUST00000122072 546 ntBASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Gm25888-201ENSMUST00000157778 302 ntBASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Gm22159-201ENSMUST00000158412 130 ntBASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Gm3111-201ENSMUST00000167426 490 ntBASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Gm5900-201ENSMUST00000179862 375 ntBASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Gm17771-201ENSMUST00000194477 1147 ntBASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Mir497-201ENSMUST00000200557 84 ntBASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Gm45071-201ENSMUST00000205353 571 ntBASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 AC116589.7-201ENSMUST00000221061 239 ntBASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 AC164117.1-201ENSMUST00000221726 239 ntBASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 AC156790.3-201ENSMUST00000226200 254 ntBASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Gm26228-201ENSMUST00000082512 107 ntBASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Gm25080-201ENSMUST00000082526 107 ntBASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Mir151-201ENSMUST00000083678 68 ntBASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Gm25518-201ENSMUST00000083864 107 ntBASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Snora33-201ENSMUST00000093556 129 ntBASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Gm20541-201ENSMUST00000173035 1406 ntBASIC2.14□□□□□ -2.07
Ccdc40Q8BI79 Gm25094-201ENSMUST00000103992 131 ntBASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Gm15067-201ENSMUST00000119534 156 ntBASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Gm13804-201ENSMUST00000119552 172 ntBASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Gm14530-201ENSMUST00000122391 333 ntBASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Gm23184-201ENSMUST00000122594 131 ntBASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Gm7592-201ENSMUST00000160674 627 ntBASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Gm25020-201ENSMUST00000178071 107 ntBASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Gm27399-201ENSMUST00000184250 78 ntBASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Gm37081-201ENSMUST00000192034 196 ntBASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Gm37533-201ENSMUST00000193848 545 ntBASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Gm44135-201ENSMUST00000205221 368 ntBASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Gm44564-201ENSMUST00000207985 180 ntBASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Gm22062-201ENSMUST00000082563 107 ntBASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Gm24151-201ENSMUST00000082758 141 ntBASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Ccdc40Q8BI79 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.12□□□□□ -2.07
Ccdc40Q8BI79 Gm24098-201ENSMUST00000102075 109 ntBASIC2.12□□□□□ -2.07
Ccdc40Q8BI79 Gm25381-201ENSMUST00000102078 109 ntBASIC2.12□□□□□ -2.07
Ccdc40Q8BI79 Gm22678-201ENSMUST00000116974 101 ntBASIC2.12□□□□□ -2.07
Ccdc40Q8BI79 Gm11786-201ENSMUST00000120799 155 ntBASIC2.12□□□□□ -2.07
Ccdc40Q8BI79 Gm25457-201ENSMUST00000179509 107 ntBASIC2.12□□□□□ -2.07
Ccdc40Q8BI79 Gm27511-201ENSMUST00000183502 127 ntBASIC2.12□□□□□ -2.07
Ccdc40Q8BI79 Mir6399-201ENSMUST00000184050 84 ntBASIC2.12□□□□□ -2.07
Ccdc40Q8BI79 Mir7016-201ENSMUST00000184308 72 ntBASIC2.12□□□□□ -2.07
Ccdc40Q8BI79 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms