Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm26263-201ENSMUST00000083281 164 ntBASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Mir687-201ENSMUST00000102166 89 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Gm24858-201ENSMUST00000158058 323 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Gm23196-201ENSMUST00000158806 107 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Gm20543-201ENSMUST00000174200 726 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Gm23619-201ENSMUST00000178411 94 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Gm25474-201ENSMUST00000179052 94 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Gm22047-201ENSMUST00000179176 94 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Gm29231-201ENSMUST00000179850 319 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Gm11395-201ENSMUST00000181011 499 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Gm43578-201ENSMUST00000201250 459 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Gm19032-201ENSMUST00000208584 592 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Mir151-201ENSMUST00000083678 68 ntBASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Clrn3Q8BHH8 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Clrn3Q8BHH8 Gm381-201ENSMUST00000117443 2037 ntBASIC1.66□□□□□ -2.14
Clrn3Q8BHH8 Gm15175-201ENSMUST00000117629 132 ntBASIC1.66□□□□□ -2.14
Clrn3Q8BHH8 Gm15659-201ENSMUST00000118881 341 ntBASIC1.66□□□□□ -2.14
Clrn3Q8BHH8 Gm14417-201ENSMUST00000120036 1074 ntBASIC1.66□□□□□ -2.14
Clrn3Q8BHH8 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.66□□□□□ -2.14
Clrn3Q8BHH8 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC1.66□□□□□ -2.14
Clrn3Q8BHH8 Mir6997-201ENSMUST00000184313 71 ntBASIC1.66□□□□□ -2.14
Clrn3Q8BHH8 Gm44395-201ENSMUST00000197056 153 ntBASIC1.66□□□□□ -2.14
Clrn3Q8BHH8 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.66□□□□□ -2.14
Clrn3Q8BHH8 Gm45071-201ENSMUST00000205353 571 ntBASIC1.66□□□□□ -2.14
Clrn3Q8BHH8 Gm17991-201ENSMUST00000208139 297 ntBASIC1.66□□□□□ -2.14
Clrn3Q8BHH8 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.66□□□□□ -2.14
Clrn3Q8BHH8 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.66□□□□□ -2.14
Clrn3Q8BHH8 CT009550.5-201ENSMUST00000226286 382 ntBASIC1.66□□□□□ -2.14
Clrn3Q8BHH8 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.66□□□□□ -2.14
Clrn3Q8BHH8 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Clrn3Q8BHH8 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.66□□□□□ -2.14
Clrn3Q8BHH8 Gm25485-201ENSMUST00000104120 132 ntBASIC1.65□□□□□ -2.15
Clrn3Q8BHH8 Gm13885-201ENSMUST00000117569 187 ntBASIC1.65□□□□□ -2.15
Clrn3Q8BHH8 Gm14551-201ENSMUST00000120802 256 ntBASIC1.65□□□□□ -2.15
Clrn3Q8BHH8 Gm22793-201ENSMUST00000157227 330 ntBASIC1.65□□□□□ -2.15
Clrn3Q8BHH8 Gm23718-201ENSMUST00000157350 307 ntBASIC1.65□□□□□ -2.15
Clrn3Q8BHH8 Gm26157-201ENSMUST00000158974 126 ntBASIC1.65□□□□□ -2.15
Clrn3Q8BHH8 Gm15914-201ENSMUST00000161922 309 ntBASIC1.65□□□□□ -2.15
Clrn3Q8BHH8 Gm16162-201ENSMUST00000162296 297 ntBASIC1.65□□□□□ -2.15
Clrn3Q8BHH8 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.65□□□□□ -2.15
Clrn3Q8BHH8 Gm22584-201ENSMUST00000177935 92 ntBASIC1.65□□□□□ -2.15
Clrn3Q8BHH8 Gm43004-201ENSMUST00000201872 703 ntBASIC1.65□□□□□ -2.15
Clrn3Q8BHH8 Gm29848-201ENSMUST00000203107 295 ntBASIC1.65□□□□□ -2.15
Clrn3Q8BHH8 Gm9377-201ENSMUST00000207227 623 ntBASIC1.65□□□□□ -2.15
Clrn3Q8BHH8 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.65□□□□□ -2.15
Clrn3Q8BHH8 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.65□□□□□ -2.15
Clrn3Q8BHH8 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Clrn3Q8BHH8 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Clrn3Q8BHH8 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
Clrn3Q8BHH8 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Gm22678-201ENSMUST00000116974 101 ntBASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Gm13378-201ENSMUST00000117483 336 ntBASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Gm11854-201ENSMUST00000117839 446 ntBASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Gm14835-201ENSMUST00000119039 315 ntBASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Gm24910-201ENSMUST00000157289 272 ntBASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Mir1949-201ENSMUST00000157434 141 ntBASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Gm24439-201ENSMUST00000157894 117 ntBASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Gm25454-201ENSMUST00000157947 315 ntBASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Gm22891-201ENSMUST00000158641 164 ntBASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Gm23181-201ENSMUST00000158685 110 ntBASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Mir3086-201ENSMUST00000175072 87 ntBASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Gm25994-201ENSMUST00000175392 101 ntBASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Gm18396-201ENSMUST00000177095 361 ntBASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Gm27878-201ENSMUST00000184000 106 ntBASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Gm18356-201ENSMUST00000185677 623 ntBASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Clrn3Q8BHH8 Gm12102-201ENSMUST00000118251 604 ntBASIC1.63□□□□□ -2.15
Clrn3Q8BHH8 Gm15807-201ENSMUST00000119880 1128 ntBASIC1.63□□□□□ -2.15
Clrn3Q8BHH8 Gm22236-201ENSMUST00000157093 106 ntBASIC1.63□□□□□ -2.15
Clrn3Q8BHH8 Gm22076-201ENSMUST00000158601 84 ntBASIC1.63□□□□□ -2.15
Clrn3Q8BHH8 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.63□□□□□ -2.15
Clrn3Q8BHH8 Gm25020-201ENSMUST00000178071 107 ntBASIC1.63□□□□□ -2.15
Clrn3Q8BHH8 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Clrn3Q8BHH8 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Clrn3Q8BHH8 Gm27265-201ENSMUST00000183559 77 ntBASIC1.63□□□□□ -2.15
Clrn3Q8BHH8 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Clrn3Q8BHH8 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms