Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Gm22328-201ENSMUST00000158074 112 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Gm25224-201ENSMUST00000158195 68 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Gm23196-201ENSMUST00000158806 107 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Gm17062-201ENSMUST00000166987 461 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.58□□□□□ -2
Rfx4Q7TNK1 Gm17166-201ENSMUST00000172006 431 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Gm5967-201ENSMUST00000172723 494 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Mir6386-201ENSMUST00000183558 104 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Mir6353-201ENSMUST00000183596 113 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Gm27410-201ENSMUST00000183851 115 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Gm28000-201ENSMUST00000184380 85 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Mir6371-201ENSMUST00000184470 111 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Gm7837-201ENSMUST00000190873 412 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Gm37404-201ENSMUST00000195726 359 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Gm44223-201ENSMUST00000204854 114 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Gm45119-201ENSMUST00000207612 199 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Rfx4Q7TNK1 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Rfx4Q7TNK1 Gm25079-201ENSMUST00000082529 203 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Snord42a-201ENSMUST00000082606 65 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Gm24623-201ENSMUST00000082616 194 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Gm26457-201ENSMUST00000082678 78 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 n-R5s166-201ENSMUST00000082898 121 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Rfx4Q7TNK1 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Rfx4Q7TNK1 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.58□□□□□ -2
Rfx4Q7TNK1 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
Rfx4Q7TNK1 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm14551-201ENSMUST00000120802 256 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm14980-201ENSMUST00000121247 736 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm11363-201ENSMUST00000121672 548 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm14564-201ENSMUST00000122159 294 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.57□□□□□ -2
Rfx4Q7TNK1 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm23713-201ENSMUST00000157353 70 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm22615-201ENSMUST00000158102 70 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm22242-201ENSMUST00000175224 118 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm27698-201ENSMUST00000184060 249 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm38238-201ENSMUST00000194334 346 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.57□□□□□ -2
Rfx4Q7TNK1 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm44844-201ENSMUST00000207242 336 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm44594-201ENSMUST00000208982 407 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm44811-201ENSMUST00000209120 228 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm7948-201ENSMUST00000212607 844 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 AC124772.1-201ENSMUST00000221325 151 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.57□□□□□ -2
Rfx4Q7TNK1 Snord68-201ENSMUST00000082516 86 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm22507-201ENSMUST00000082773 160 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm23727-201ENSMUST00000083352 164 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm26164-201ENSMUST00000083793 104 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Rfx4Q7TNK1 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.57□□□□□ -2
Rfx4Q7TNK1 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.57□□□□□ -2
Rfx4Q7TNK1 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.57□□□□□ -2
Rfx4Q7TNK1 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Rfx4Q7TNK1 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.57□□□□□ -2
Rfx4Q7TNK1 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Rfx4Q7TNK1 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.56□□□□□ -2
Rfx4Q7TNK1 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.56□□□□□ -2
Rfx4Q7TNK1 Gm11065-201ENSMUST00000111462 228 ntBASIC2.56□□□□□ -2
Rfx4Q7TNK1 Gm6071-201ENSMUST00000119561 440 ntBASIC2.56□□□□□ -2
Rfx4Q7TNK1 DQ267100-201ENSMUST00000122600 72 ntBASIC2.56□□□□□ -2
Rfx4Q7TNK1 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.56□□□□□ -2
Rfx4Q7TNK1 Gm23559-201ENSMUST00000157824 103 ntBASIC2.56□□□□□ -2
Rfx4Q7TNK1 Gm23223-201ENSMUST00000158119 127 ntBASIC2.56□□□□□ -2
Rfx4Q7TNK1 Gm27510-201ENSMUST00000158214 64 ntBASIC2.56□□□□□ -2
Rfx4Q7TNK1 Gm25486-201ENSMUST00000158726 63 ntBASIC2.56□□□□□ -2
Rfx4Q7TNK1 Gm17187-201ENSMUST00000164622 410 ntBASIC2.56□□□□□ -2
Rfx4Q7TNK1 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.56□□□□□ -2
Rfx4Q7TNK1 Gm20462-201ENSMUST00000172623 408 ntBASIC2.56□□□□□ -2
Rfx4Q7TNK1 Gm27640-201ENSMUST00000184580 147 ntBASIC2.56□□□□□ -2
Rfx4Q7TNK1 Gm28579-201ENSMUST00000186143 369 ntBASIC2.56□□□□□ -2
Rfx4Q7TNK1 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.56□□□□□ -2
Rfx4Q7TNK1 Gm18453-201ENSMUST00000208000 626 ntBASIC2.56□□□□□ -2
Rfx4Q7TNK1 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Rfx4Q7TNK1 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.56□□□□□ -2
Rfx4Q7TNK1 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Rfx4Q7TNK1 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.56□□□□□ -2
Rfx4Q7TNK1 Snord14d-201ENSMUST00000083424 86 ntBASIC2.56□□□□□ -2
Rfx4Q7TNK1 Mir181a-2-201ENSMUST00000083489 76 ntBASIC2.56□□□□□ -2
Rfx4Q7TNK1 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Rfx4Q7TNK1 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
Rfx4Q7TNK1 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.55□□□□□ -2
Rfx4Q7TNK1 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.55□□□□□ -2
Rfx4Q7TNK1 Mir878-201ENSMUST00000104680 78 ntBASIC2.55□□□□□ -2
Rfx4Q7TNK1 Gm13329-201ENSMUST00000117063 265 ntBASIC2.55□□□□□ -2
Rfx4Q7TNK1 Gm11798-201ENSMUST00000119150 421 ntBASIC2.55□□□□□ -2
Rfx4Q7TNK1 Gm15379-201ENSMUST00000121224 648 ntBASIC2.55□□□□□ -2
Rfx4Q7TNK1 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 173.1 ms