Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ubfd1Q78JW9 Mir1198-201ENSMUST00000116995 121 ntBASIC3.06□□□□□ -1.92
Ubfd1Q78JW9 Gm13443-201ENSMUST00000120770 555 ntBASIC3.06□□□□□ -1.92
Ubfd1Q78JW9 Gm26477-201ENSMUST00000122617 323 ntBASIC3.06□□□□□ -1.92
Ubfd1Q78JW9 Gm26027-201ENSMUST00000122725 268 ntBASIC3.06□□□□□ -1.92
Ubfd1Q78JW9 Gm24225-201ENSMUST00000158825 98 ntBASIC3.06□□□□□ -1.92
Ubfd1Q78JW9 Mir5624-201ENSMUST00000176635 61 ntBASIC3.06□□□□□ -1.92
Ubfd1Q78JW9 Mir6402-201ENSMUST00000183406 80 ntBASIC3.06□□□□□ -1.92
Ubfd1Q78JW9 Mir6993-201ENSMUST00000184912 65 ntBASIC3.06□□□□□ -1.92
Ubfd1Q78JW9 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC3.06□□□□□ -1.92
Ubfd1Q78JW9 Gm44419-201ENSMUST00000203338 229 ntBASIC3.06□□□□□ -1.92
Ubfd1Q78JW9 Gm44794-201ENSMUST00000206550 411 ntBASIC3.06□□□□□ -1.92
Ubfd1Q78JW9 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.06□□□□□ -1.92
Ubfd1Q78JW9 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ubfd1Q78JW9 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ubfd1Q78JW9 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ubfd1Q78JW9 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.06□□□□□ -1.92
Ubfd1Q78JW9 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ubfd1Q78JW9 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm24338-201ENSMUST00000104205 127 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm15282-201ENSMUST00000117707 300 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm12934-201ENSMUST00000119221 343 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm26256-201ENSMUST00000122499 186 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm24635-201ENSMUST00000122712 128 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm23829-201ENSMUST00000157392 270 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Mir6370-201ENSMUST00000183510 120 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm28002-201ENSMUST00000184832 100 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm28838-201ENSMUST00000186338 315 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm29635-201ENSMUST00000187221 315 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm29026-201ENSMUST00000187787 315 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm28797-201ENSMUST00000188543 315 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm20257-202ENSMUST00000188643 130 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm28855-201ENSMUST00000188680 315 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm28705-201ENSMUST00000189548 315 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm28939-201ENSMUST00000190351 315 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm28223-201ENSMUST00000190469 315 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm29092-201ENSMUST00000190768 315 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm37338-201ENSMUST00000191986 127 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Trav5d-2-201ENSMUST00000196107 275 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Trav5n-2-201ENSMUST00000197136 275 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm45687-201ENSMUST00000209454 155 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm6842-201ENSMUST00000211361 390 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 LOC667541-201ENSMUST00000223408 278 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm23615-201ENSMUST00000082602 65 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm24764-201ENSMUST00000083686 199 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.05□□□□□ -1.92
Ubfd1Q78JW9 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Gm23142-201ENSMUST00000101848 105 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Gm26240-201ENSMUST00000101893 105 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Gm13439-201ENSMUST00000117541 409 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Gm12235-201ENSMUST00000118596 170 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Gm14069-201ENSMUST00000120815 229 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Gm12785-201ENSMUST00000122052 172 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Gm24627-201ENSMUST00000122764 138 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Gm26102-201ENSMUST00000157251 284 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Gm24787-201ENSMUST00000157380 123 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Gm22101-201ENSMUST00000157928 103 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Gm26061-201ENSMUST00000175584 108 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Gm22308-201ENSMUST00000177609 107 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Gm27470-201ENSMUST00000184070 210 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Gm45778-201ENSMUST00000211959 153 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 mt-Td-201ENSMUST00000082404 70 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Gm22997-201ENSMUST00000082845 107 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Gm22443-201ENSMUST00000082890 107 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 AF357341-201ENSMUST00000083088 75 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Ubfd1Q78JW9 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ubfd1Q78JW9 CT030170.3-201ENSMUST00000221205 1815 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 129.8 ms