Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Gm23089-201ENSMUST00000178947 94 ntBASIC0.97□□□□□ -2.25
Topbp1Q6ZQF0 Snord116l10-201ENSMUST00000179053 94 ntBASIC0.97□□□□□ -2.25
Topbp1Q6ZQF0 Gm24153-201ENSMUST00000179280 94 ntBASIC0.97□□□□□ -2.25
Topbp1Q6ZQF0 Gm25597-201ENSMUST00000179388 94 ntBASIC0.97□□□□□ -2.25
Topbp1Q6ZQF0 Snord116l1-201ENSMUST00000179518 94 ntBASIC0.97□□□□□ -2.25
Topbp1Q6ZQF0 Gm25816-201ENSMUST00000179764 94 ntBASIC0.97□□□□□ -2.25
Topbp1Q6ZQF0 Snord116l8-201ENSMUST00000179889 94 ntBASIC0.97□□□□□ -2.25
Topbp1Q6ZQF0 Snord116l7-201ENSMUST00000179895 94 ntBASIC0.97□□□□□ -2.25
Topbp1Q6ZQF0 Snord116l5-201ENSMUST00000179927 94 ntBASIC0.97□□□□□ -2.25
Topbp1Q6ZQF0 Snord116l6-201ENSMUST00000179955 94 ntBASIC0.97□□□□□ -2.25
Topbp1Q6ZQF0 Gm26188-201ENSMUST00000179963 94 ntBASIC0.97□□□□□ -2.25
Topbp1Q6ZQF0 Gm26433-201ENSMUST00000180227 94 ntBASIC0.97□□□□□ -2.25
Topbp1Q6ZQF0 Snord116l11-201ENSMUST00000180312 94 ntBASIC0.97□□□□□ -2.25
Topbp1Q6ZQF0 Gm22128-201ENSMUST00000180346 94 ntBASIC0.97□□□□□ -2.25
Topbp1Q6ZQF0 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC0.97□□□□□ -2.25
Topbp1Q6ZQF0 Gm20058-201ENSMUST00000186939 284 ntBASIC0.97□□□□□ -2.25
Topbp1Q6ZQF0 Gm37576-201ENSMUST00000194228 372 ntBASIC0.97□□□□□ -2.25
Topbp1Q6ZQF0 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC0.97□□□□□ -2.25
Topbp1Q6ZQF0 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC0.97□□□□□ -2.25
Topbp1Q6ZQF0 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
Topbp1Q6ZQF0 Gm14129-201ENSMUST00000122436 291 ntBASIC0.96□□□□□ -2.26
Topbp1Q6ZQF0 Gm23713-201ENSMUST00000157353 70 ntBASIC0.96□□□□□ -2.26
Topbp1Q6ZQF0 Gm22615-201ENSMUST00000158102 70 ntBASIC0.96□□□□□ -2.26
Topbp1Q6ZQF0 Gm26157-201ENSMUST00000158974 126 ntBASIC0.96□□□□□ -2.26
Topbp1Q6ZQF0 Gm19147-201ENSMUST00000199622 652 ntBASIC0.96□□□□□ -2.26
Topbp1Q6ZQF0 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.96□□□□□ -2.26
Topbp1Q6ZQF0 Mir325-201ENSMUST00000083491 98 ntBASIC0.96□□□□□ -2.26
Topbp1Q6ZQF0 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.96□□□□□ -2.26
Topbp1Q6ZQF0 Gm10360-201ENSMUST00000097219 272 ntBASIC0.96□□□□□ -2.26
Topbp1Q6ZQF0 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC0.96□□□□□ -2.26
Topbp1Q6ZQF0 Gm24915-201ENSMUST00000157288 78 ntBASIC0.95□□□□□ -2.26
Topbp1Q6ZQF0 Gm17119-201ENSMUST00000163943 280 ntBASIC0.95□□□□□ -2.26
Topbp1Q6ZQF0 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.95□□□□□ -2.26
Topbp1Q6ZQF0 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.95□□□□□ -2.26
Topbp1Q6ZQF0 Mir3086-201ENSMUST00000175072 87 ntBASIC0.95□□□□□ -2.26
Topbp1Q6ZQF0 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC0.95□□□□□ -2.26
Topbp1Q6ZQF0 Mir141-201ENSMUST00000083540 72 ntBASIC0.95□□□□□ -2.26
Topbp1Q6ZQF0 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
Topbp1Q6ZQF0 Mir804-201ENSMUST00000103251 95 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Gm22048-201ENSMUST00000104721 89 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Gm22482-201ENSMUST00000122563 359 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 n-R5s192-201ENSMUST00000122577 119 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Gm22537-201ENSMUST00000158172 199 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Gm23116-201ENSMUST00000158481 67 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Gm25839-201ENSMUST00000158921 103 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Gm25944-201ENSMUST00000178758 94 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Mir6372-201ENSMUST00000185114 109 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Ighv12-1-201ENSMUST00000195542 329 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Gm7692-201ENSMUST00000213534 409 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Gm25683-201ENSMUST00000083940 131 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Gm2003-201ENSMUST00000118537 636 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Gm24381-201ENSMUST00000122697 104 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Gm23466-201ENSMUST00000157133 106 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Gm24777-201ENSMUST00000157644 107 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Gm37029-201ENSMUST00000195773 239 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Gm18268-201ENSMUST00000208445 943 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Gm45616-201ENSMUST00000211711 319 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Gm8940-201ENSMUST00000212585 219 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Gm26439-201ENSMUST00000082592 106 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Gm36989-201ENSMUST00000193225 2160 ntBASIC0.94□□□□□ -2.26
Topbp1Q6ZQF0 Gm14517-201ENSMUST00000119040 337 ntBASIC0.93□□□□□ -2.26
Topbp1Q6ZQF0 Gm12640-201ENSMUST00000120097 310 ntBASIC0.93□□□□□ -2.26
Topbp1Q6ZQF0 Gm26275-201ENSMUST00000157101 268 ntBASIC0.93□□□□□ -2.26
Topbp1Q6ZQF0 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC0.93□□□□□ -2.26
Topbp1Q6ZQF0 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC0.93□□□□□ -2.26
Topbp1Q6ZQF0 Gm43345-201ENSMUST00000199484 269 ntBASIC0.93□□□□□ -2.26
Topbp1Q6ZQF0 Igkv1-136-201ENSMUST00000200635 297 ntBASIC0.93□□□□□ -2.26
Topbp1Q6ZQF0 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.93□□□□□ -2.26
Topbp1Q6ZQF0 AC113031.5-201ENSMUST00000227116 606 ntBASIC0.93□□□□□ -2.26
Topbp1Q6ZQF0 AC125523.1-201ENSMUST00000228018 934 ntBASIC0.93□□□□□ -2.26
Topbp1Q6ZQF0 Gm26206-201ENSMUST00000082908 110 ntBASIC0.93□□□□□ -2.26
Topbp1Q6ZQF0 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Topbp1Q6ZQF0 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Topbp1Q6ZQF0 Gm14800-201ENSMUST00000122084 1272 ntBASIC0.92□□□□□ -2.26
Topbp1Q6ZQF0 Gm26256-201ENSMUST00000122499 186 ntBASIC0.92□□□□□ -2.26
Topbp1Q6ZQF0 n-R5s216-201ENSMUST00000122755 112 ntBASIC0.92□□□□□ -2.26
Topbp1Q6ZQF0 Gm25711-201ENSMUST00000158633 128 ntBASIC0.92□□□□□ -2.26
Topbp1Q6ZQF0 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Topbp1Q6ZQF0 Gm25598-201ENSMUST00000179031 107 ntBASIC0.92□□□□□ -2.26
Topbp1Q6ZQF0 Gm25936-201ENSMUST00000179952 114 ntBASIC0.92□□□□□ -2.26
Topbp1Q6ZQF0 Mir6389-201ENSMUST00000183661 102 ntBASIC0.92□□□□□ -2.26
Topbp1Q6ZQF0 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.92□□□□□ -2.26
Topbp1Q6ZQF0 Gm43007-201ENSMUST00000197618 291 ntBASIC0.92□□□□□ -2.26
Topbp1Q6ZQF0 Gm43171-201ENSMUST00000199882 291 ntBASIC0.92□□□□□ -2.26
Topbp1Q6ZQF0 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.92□□□□□ -2.26
Topbp1Q6ZQF0 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.92□□□□□ -2.26
Topbp1Q6ZQF0 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Topbp1Q6ZQF0 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Topbp1Q6ZQF0 Gm14932-201ENSMUST00000117112 453 ntBASIC0.91□□□□□ -2.26
Topbp1Q6ZQF0 Gm24476-201ENSMUST00000157437 131 ntBASIC0.91□□□□□ -2.26
Topbp1Q6ZQF0 Gm22425-201ENSMUST00000158532 138 ntBASIC0.91□□□□□ -2.26
Topbp1Q6ZQF0 Gm24875-201ENSMUST00000158888 104 ntBASIC0.91□□□□□ -2.26
Topbp1Q6ZQF0 Gm20118-201ENSMUST00000187207 162 ntBASIC0.91□□□□□ -2.26
Topbp1Q6ZQF0 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.91□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms