Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm25434-201ENSMUST00000158278 167 ntBASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Gm24878-201ENSMUST00000158782 104 ntBASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Gm23725-201ENSMUST00000177876 107 ntBASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Gm28838-201ENSMUST00000186338 315 ntBASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Gm29635-201ENSMUST00000187221 315 ntBASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Gm29026-201ENSMUST00000187787 315 ntBASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Gm28797-201ENSMUST00000188543 315 ntBASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Gm28855-201ENSMUST00000188680 315 ntBASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Gm28705-201ENSMUST00000189548 315 ntBASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Gm28939-201ENSMUST00000190351 315 ntBASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Gm28223-201ENSMUST00000190469 315 ntBASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Gm29092-201ENSMUST00000190768 315 ntBASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Gm33354-201ENSMUST00000195448 906 ntBASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Gm17990-201ENSMUST00000211728 553 ntBASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Gm25579-201ENSMUST00000083407 106 ntBASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.44□□□□□ -2.02
Snrnp40Q6PE01 Gm14624-201ENSMUST00000117746 192 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm15896-201ENSMUST00000118045 440 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm11363-201ENSMUST00000121672 548 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm22227-201ENSMUST00000157356 259 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm24601-201ENSMUST00000157970 143 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm23411-201ENSMUST00000157988 62 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm22382-201ENSMUST00000158185 130 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm22858-201ENSMUST00000174972 76 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm24810-201ENSMUST00000175317 70 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Mir3075-201ENSMUST00000175340 85 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Snord93-201ENSMUST00000175580 71 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm27761-201ENSMUST00000184091 131 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm28506-201ENSMUST00000189937 150 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm38041-201ENSMUST00000194445 661 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm42925-201ENSMUST00000197359 285 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm6796-201ENSMUST00000211919 243 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 AC164567.2-201ENSMUST00000219363 445 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm23627-201ENSMUST00000082459 107 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm22502-201ENSMUST00000082488 107 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm22977-201ENSMUST00000082615 107 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm24149-201ENSMUST00000082757 107 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm25475-201ENSMUST00000082825 180 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm24043-201ENSMUST00000083108 116 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm22577-201ENSMUST00000083731 109 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm24698-201ENSMUST00000083883 130 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm3867-201ENSMUST00000086108 279 ntBASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Snrnp40Q6PE01 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Mir1942-201ENSMUST00000157274 63 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Gm25909-201ENSMUST00000157619 121 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Gm24192-201ENSMUST00000157978 145 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Gm24853-201ENSMUST00000158026 121 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Gm24846-201ENSMUST00000158033 108 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Gm25863-201ENSMUST00000158249 329 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Gm24885-201ENSMUST00000158783 270 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Gm21737-201ENSMUST00000178112 664 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Gm21815-201ENSMUST00000178213 664 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Gm20874-201ENSMUST00000178356 663 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Gm20901-201ENSMUST00000180177 664 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Gm21647-201ENSMUST00000189755 664 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 AC109212.1-201ENSMUST00000215561 427 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 CT009718.4-201ENSMUST00000221881 109 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 AC104832.1-201ENSMUST00000222938 550 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Gm24765-201ENSMUST00000083691 103 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Mir127-201ENSMUST00000093568 70 ntBASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Snrnp40Q6PE01 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Snrnp40Q6PE01 Gm14390-201ENSMUST00000117505 1695 ntBASIC2.41□□□□□ -2.02
Snrnp40Q6PE01 Gm12871-201ENSMUST00000118758 438 ntBASIC2.41□□□□□ -2.02
Snrnp40Q6PE01 Gm12934-201ENSMUST00000119221 343 ntBASIC2.41□□□□□ -2.02
Snrnp40Q6PE01 Gm14574-201ENSMUST00000120644 279 ntBASIC2.41□□□□□ -2.02
Snrnp40Q6PE01 Defa-ps13-201ENSMUST00000120695 204 ntBASIC2.41□□□□□ -2.02
Snrnp40Q6PE01 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Snrnp40Q6PE01 Gm24304-201ENSMUST00000177635 107 ntBASIC2.41□□□□□ -2.02
Snrnp40Q6PE01 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Snrnp40Q6PE01 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 125.2 ms