Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC3.27□□□□□ -1.89
Rnf220Q6PDX6 Gm12155-201ENSMUST00000121267 160 ntBASIC3.27□□□□□ -1.89
Rnf220Q6PDX6 Gm25454-201ENSMUST00000157947 315 ntBASIC3.27□□□□□ -1.89
Rnf220Q6PDX6 Mir3068-202ENSMUST00000197755 79 ntBASIC3.27□□□□□ -1.89
Rnf220Q6PDX6 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC3.27□□□□□ -1.89
Rnf220Q6PDX6 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.27□□□□□ -1.89
Rnf220Q6PDX6 AC100209.2-201ENSMUST00000224461 451 ntBASIC3.27□□□□□ -1.89
Rnf220Q6PDX6 Gm10088-201ENSMUST00000074116 423 ntBASIC3.27□□□□□ -1.89
Rnf220Q6PDX6 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Rnf220Q6PDX6 Gm26497-201ENSMUST00000083146 107 ntBASIC3.27□□□□□ -1.89
Rnf220Q6PDX6 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.27□□□□□ -1.89
Rnf220Q6PDX6 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.27□□□□□ -1.89
Rnf220Q6PDX6 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Rnf220Q6PDX6 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Rnf220Q6PDX6 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Rnf220Q6PDX6 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.26□□□□□ -1.89
Rnf220Q6PDX6 Mir551b-201ENSMUST00000102165 98 ntBASIC3.26□□□□□ -1.89
Rnf220Q6PDX6 Gm22270-201ENSMUST00000104034 132 ntBASIC3.26□□□□□ -1.89
Rnf220Q6PDX6 Gm14073-201ENSMUST00000117344 381 ntBASIC3.26□□□□□ -1.89
Rnf220Q6PDX6 Gm11936-201ENSMUST00000118323 160 ntBASIC3.26□□□□□ -1.89
Rnf220Q6PDX6 Gm13581-201ENSMUST00000120675 278 ntBASIC3.26□□□□□ -1.89
Rnf220Q6PDX6 Gm15263-201ENSMUST00000121556 642 ntBASIC3.26□□□□□ -1.89
Rnf220Q6PDX6 Gm22316-201ENSMUST00000158012 216 ntBASIC3.26□□□□□ -1.89
Rnf220Q6PDX6 Gm22839-201ENSMUST00000158436 304 ntBASIC3.26□□□□□ -1.89
Rnf220Q6PDX6 Gm27747-201ENSMUST00000184707 85 ntBASIC3.26□□□□□ -1.89
Rnf220Q6PDX6 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.26□□□□□ -1.89
Rnf220Q6PDX6 Gm45209-201ENSMUST00000207122 353 ntBASIC3.26□□□□□ -1.89
Rnf220Q6PDX6 AC145736.2-201ENSMUST00000216305 365 ntBASIC3.26□□□□□ -1.89
Rnf220Q6PDX6 Gm46369-201ENSMUST00000221577 401 ntBASIC3.26□□□□□ -1.89
Rnf220Q6PDX6 Gm5548-201ENSMUST00000055878 397 ntBASIC3.26□□□□□ -1.89
Rnf220Q6PDX6 Gm25078-201ENSMUST00000082530 107 ntBASIC3.26□□□□□ -1.89
Rnf220Q6PDX6 Gm22062-201ENSMUST00000082563 107 ntBASIC3.26□□□□□ -1.89
Rnf220Q6PDX6 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Rnf220Q6PDX6 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Rnf220Q6PDX6 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Gm25765-201ENSMUST00000104100 132 ntBASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Mir875-201ENSMUST00000104698 78 ntBASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Gm13432-201ENSMUST00000118861 241 ntBASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Gm15120-201ENSMUST00000120602 301 ntBASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Gm11982-201ENSMUST00000121480 314 ntBASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Gm23183-201ENSMUST00000122595 323 ntBASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Mir6960-201ENSMUST00000183449 61 ntBASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Gm37001-201ENSMUST00000193377 190 ntBASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Mir3535-201ENSMUST00000197651 147 ntBASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Gm44475-201ENSMUST00000204041 424 ntBASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Gm44294-201ENSMUST00000205090 728 ntBASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Gm24152-201ENSMUST00000082764 163 ntBASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.25□□□□□ -1.89
Rnf220Q6PDX6 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Mir872-201ENSMUST00000104728 81 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Mir1198-201ENSMUST00000116995 121 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Gm25543-201ENSMUST00000122678 312 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Gm24244-201ENSMUST00000157317 130 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Gm22382-201ENSMUST00000158185 130 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Gm25718-201ENSMUST00000158632 118 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Gm22853-201ENSMUST00000174974 131 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Gm23365-201ENSMUST00000175019 125 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Gm25960-201ENSMUST00000175110 125 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Gm44453-201ENSMUST00000175161 126 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Gm25195-201ENSMUST00000177656 126 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Gm37763-201ENSMUST00000193445 120 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Gm38060-201ENSMUST00000194822 464 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Gm45288-201ENSMUST00000210236 151 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Gm4945-201ENSMUST00000075152 453 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Snord15a-201ENSMUST00000083888 148 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 AC160115.1-201ENSMUST00000224678 1574 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Gm15102-201ENSMUST00000118740 1502 ntBASIC3.24□□□□□ -1.89
Rnf220Q6PDX6 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Rnf220Q6PDX6 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Rnf220Q6PDX6 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.23□□□□□ -1.89
Rnf220Q6PDX6 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.23□□□□□ -1.89
Rnf220Q6PDX6 Gm15497-201ENSMUST00000119137 551 ntBASIC3.23□□□□□ -1.89
Rnf220Q6PDX6 Gm12876-201ENSMUST00000120975 408 ntBASIC3.23□□□□□ -1.89
Rnf220Q6PDX6 Gm22889-201ENSMUST00000158639 58 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 155.2 ms