Protein–RNA interactions for Protein: Q6PDM4

Ccdc36, Interactor of HORMAD1 protein 1, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc36Q6PDM4 Gm25153-201ENSMUST00000157118 156 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm23068-201ENSMUST00000158239 293 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm8292-201ENSMUST00000162574 396 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm24418-201ENSMUST00000177597 79 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm23933-201ENSMUST00000178405 79 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm24639-201ENSMUST00000178518 79 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm23076-201ENSMUST00000179082 79 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm25077-201ENSMUST00000179157 79 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Mir6951-201ENSMUST00000183910 75 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm27385-201ENSMUST00000184747 104 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm28399-201ENSMUST00000186221 318 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm28572-201ENSMUST00000187444 318 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm18964-201ENSMUST00000193013 563 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm44472-201ENSMUST00000204922 943 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm26494-201ENSMUST00000083154 143 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm24493-201ENSMUST00000083805 143 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Gm26147-201ENSMUST00000104479 114 ntBASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Gm14588-201ENSMUST00000119895 172 ntBASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Gm14678-201ENSMUST00000121396 482 ntBASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Mup-ps22-201ENSMUST00000121611 243 ntBASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Gm15986-201ENSMUST00000122153 400 ntBASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Gm22083-201ENSMUST00000157586 102 ntBASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Gm27761-201ENSMUST00000184091 131 ntBASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Gm27753-201ENSMUST00000184742 203 ntBASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Gm43955-201ENSMUST00000204332 142 ntBASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 AC102369.1-201ENSMUST00000218415 373 ntBASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Gm19326-201ENSMUST00000219818 326 ntBASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Gm25796-201ENSMUST00000082645 163 ntBASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Gm25512-201ENSMUST00000083863 107 ntBASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.05□□□□□ -2.08
Ccdc36Q6PDM4 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Gm22831-201ENSMUST00000102473 109 ntBASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Gm15497-201ENSMUST00000119137 551 ntBASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Gm14593-201ENSMUST00000119948 294 ntBASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Gm29604-201ENSMUST00000187176 163 ntBASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Gm37455-201ENSMUST00000191993 529 ntBASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Trbv24-201ENSMUST00000194614 347 ntBASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Gm43723-201ENSMUST00000196886 189 ntBASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Gm45252-201ENSMUST00000211579 397 ntBASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Gm18000-201ENSMUST00000212153 800 ntBASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Gm23404-201ENSMUST00000082543 97 ntBASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Gm25628-201ENSMUST00000084002 105 ntBASIC2.04□□□□□ -2.08
Ccdc36Q6PDM4 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.03□□□□□ -2.08
Ccdc36Q6PDM4 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Ccdc36Q6PDM4 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Ccdc36Q6PDM4 Gm25624-201ENSMUST00000157222 275 ntBASIC2.03□□□□□ -2.08
Ccdc36Q6PDM4 Gm24691-201ENSMUST00000157762 140 ntBASIC2.03□□□□□ -2.08
Ccdc36Q6PDM4 Gm23411-201ENSMUST00000157988 62 ntBASIC2.03□□□□□ -2.08
Ccdc36Q6PDM4 Gm24737-201ENSMUST00000158861 100 ntBASIC2.03□□□□□ -2.08
Ccdc36Q6PDM4 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.03□□□□□ -2.08
Ccdc36Q6PDM4 Gm23523-201ENSMUST00000180190 107 ntBASIC2.03□□□□□ -2.08
Ccdc36Q6PDM4 Mir7013-201ENSMUST00000183540 72 ntBASIC2.03□□□□□ -2.08
Ccdc36Q6PDM4 Mir6917-201ENSMUST00000184111 61 ntBASIC2.03□□□□□ -2.08
Ccdc36Q6PDM4 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.03□□□□□ -2.08
Ccdc36Q6PDM4 Gm28843-201ENSMUST00000189198 678 ntBASIC2.03□□□□□ -2.08
Ccdc36Q6PDM4 Gm29546-201ENSMUST00000191171 678 ntBASIC2.03□□□□□ -2.08
Ccdc36Q6PDM4 Gm43083-201ENSMUST00000199594 476 ntBASIC2.03□□□□□ -2.08
Ccdc36Q6PDM4 Gm44526-201ENSMUST00000204664 121 ntBASIC2.03□□□□□ -2.08
Ccdc36Q6PDM4 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.03□□□□□ -2.08
Ccdc36Q6PDM4 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.03□□□□□ -2.08
Ccdc36Q6PDM4 Gm17990-201ENSMUST00000211728 553 ntBASIC2.03□□□□□ -2.08
Ccdc36Q6PDM4 Gm45772-201ENSMUST00000212961 240 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms