Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Gm26081-201ENSMUST00000104068 132 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Gm13922-201ENSMUST00000119505 156 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Gm14649-201ENSMUST00000121814 324 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Gm25543-201ENSMUST00000122678 312 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Gm24503-201ENSMUST00000158454 135 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Gm10067-201ENSMUST00000179462 348 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Mir7031-201ENSMUST00000183860 65 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Ighv15-1-201ENSMUST00000194450 276 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Gm45162-201ENSMUST00000209013 618 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Gm17829-201ENSMUST00000219782 344 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Gm5548-201ENSMUST00000055878 397 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Gm24356-201ENSMUST00000082859 106 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Gm25136-201ENSMUST00000083253 115 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Gm17752-201ENSMUST00000185787 3726 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Mir669b-201ENSMUST00000102172 97 ntBASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Gm23948-201ENSMUST00000104030 132 ntBASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Gm22966-201ENSMUST00000157957 129 ntBASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Mir1251-201ENSMUST00000175486 84 ntBASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Gm22775-201ENSMUST00000177630 120 ntBASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Gm23569-201ENSMUST00000180120 120 ntBASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Snord14d-201ENSMUST00000083424 86 ntBASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Gm26166-201ENSMUST00000083788 107 ntBASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Gm24163-201ENSMUST00000093660 132 ntBASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cpsf6Q6NVF9 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Gm25377-201ENSMUST00000104334 129 ntBASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Gm22373-201ENSMUST00000104584 89 ntBASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Gm13797-201ENSMUST00000121792 120 ntBASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Gm22988-201ENSMUST00000122759 144 ntBASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Mir1942-201ENSMUST00000157274 63 ntBASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Gm22476-201ENSMUST00000158902 100 ntBASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Gm25999-201ENSMUST00000175398 133 ntBASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Mir6345-201ENSMUST00000184286 128 ntBASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Gm45031-201ENSMUST00000206800 288 ntBASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Gm45543-201ENSMUST00000209327 88 ntBASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Gm45687-201ENSMUST00000209454 155 ntBASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.68□□□□□ -1.82
Cpsf6Q6NVF9 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 Gm24281-201ENSMUST00000104234 136 ntBASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 Gm23713-201ENSMUST00000157353 70 ntBASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 Gm22615-201ENSMUST00000158102 70 ntBASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 Mir7682-201ENSMUST00000198467 58 ntBASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 Gm42774-201ENSMUST00000198854 283 ntBASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 Snord21-201ENSMUST00000082519 94 ntBASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 Gm24453-201ENSMUST00000083346 76 ntBASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cpsf6Q6NVF9 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cpsf6Q6NVF9 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 152.1 ms