Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
Ift88Q61371 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.2□□□□□ -1.9
Ift88Q61371 Gm28995-201ENSMUST00000186625 261 ntBASIC3.2□□□□□ -1.9
Ift88Q61371 Gm20257-202ENSMUST00000188643 130 ntBASIC3.2□□□□□ -1.9
Ift88Q61371 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.2□□□□□ -1.9
Ift88Q61371 Gm32381-201ENSMUST00000203192 476 ntBASIC3.2□□□□□ -1.9
Ift88Q61371 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC3.2□□□□□ -1.9
Ift88Q61371 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC3.2□□□□□ -1.9
Ift88Q61371 Gm23406-201ENSMUST00000082537 122 ntBASIC3.2□□□□□ -1.9
Ift88Q61371 Gm22620-201ENSMUST00000082700 133 ntBASIC3.2□□□□□ -1.9
Ift88Q61371 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Ift88Q61371 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.2□□□□□ -1.9
Ift88Q61371 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Ift88Q61371 AC122887.2-201ENSMUST00000219465 1603 ntBASIC3.19□□□□□ -1.9
Ift88Q61371 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Ift88Q61371 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ift88Q61371 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ift88Q61371 Gm23142-201ENSMUST00000101848 105 ntBASIC3.19□□□□□ -1.9
Ift88Q61371 Gm26240-201ENSMUST00000101893 105 ntBASIC3.19□□□□□ -1.9
Ift88Q61371 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
Ift88Q61371 Gm16171-201ENSMUST00000118004 324 ntBASIC3.19□□□□□ -1.9
Ift88Q61371 Gm9119-201ENSMUST00000118866 495 ntBASIC3.19□□□□□ -1.9
Ift88Q61371 Gm15799-201ENSMUST00000120899 289 ntBASIC3.19□□□□□ -1.9
Ift88Q61371 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.19□□□□□ -1.9
Ift88Q61371 Gm23183-201ENSMUST00000122595 323 ntBASIC3.19□□□□□ -1.9
Ift88Q61371 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.19□□□□□ -1.9
Ift88Q61371 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC3.19□□□□□ -1.9
Ift88Q61371 Gm22654-201ENSMUST00000157874 105 ntBASIC3.19□□□□□ -1.9
Ift88Q61371 Gm22308-201ENSMUST00000177609 107 ntBASIC3.19□□□□□ -1.9
Ift88Q61371 Gm43239-201ENSMUST00000200131 201 ntBASIC3.19□□□□□ -1.9
Ift88Q61371 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Ift88Q61371 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.19□□□□□ -1.9
Ift88Q61371 Gm5265-201ENSMUST00000076828 342 ntBASIC3.19□□□□□ -1.9
Ift88Q61371 Gm22997-201ENSMUST00000082845 107 ntBASIC3.19□□□□□ -1.9
Ift88Q61371 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
Ift88Q61371 AC121844.2-201ENSMUST00000219067 2066 ntBASIC3.19□□□□□ -1.9
Ift88Q61371 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ift88Q61371 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC3.19□□□□□ -1.9
Ift88Q61371 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ift88Q61371 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ift88Q61371 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Ift88Q61371 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ift88Q61371 Gm11356-201ENSMUST00000118974 192 ntBASIC3.18□□□□□ -1.9
Ift88Q61371 Defa-ps13-201ENSMUST00000120695 204 ntBASIC3.18□□□□□ -1.9
Ift88Q61371 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.18□□□□□ -1.9
Ift88Q61371 Gm25384-201ENSMUST00000157807 105 ntBASIC3.18□□□□□ -1.9
Ift88Q61371 Gm23895-201ENSMUST00000158108 160 ntBASIC3.18□□□□□ -1.9
Ift88Q61371 Gm25470-201ENSMUST00000175576 111 ntBASIC3.18□□□□□ -1.9
Ift88Q61371 Gm29397-201ENSMUST00000185205 333 ntBASIC3.18□□□□□ -1.9
Ift88Q61371 Gm37338-201ENSMUST00000191986 127 ntBASIC3.18□□□□□ -1.9
Ift88Q61371 Gm30341-201ENSMUST00000194363 289 ntBASIC3.18□□□□□ -1.9
Ift88Q61371 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.18□□□□□ -1.9
Ift88Q61371 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.18□□□□□ -1.9
Ift88Q61371 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.18□□□□□ -1.9
Ift88Q61371 Gm44824-201ENSMUST00000207021 229 ntBASIC3.18□□□□□ -1.9
Ift88Q61371 Gm45395-201ENSMUST00000209891 559 ntBASIC3.18□□□□□ -1.9
Ift88Q61371 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ift88Q61371 Gm10298-201ENSMUST00000074801 265 ntBASIC3.18□□□□□ -1.9
Ift88Q61371 Gm23723-201ENSMUST00000082996 132 ntBASIC3.18□□□□□ -1.9
Ift88Q61371 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ift88Q61371 Gm42755-201ENSMUST00000198533 1493 ntBASIC3.17□□□□□ -1.9
Ift88Q61371 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.17□□□□□ -1.9
Ift88Q61371 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ift88Q61371 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.17□□□□□ -1.9
Ift88Q61371 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.17□□□□□ -1.9
Ift88Q61371 Gm8121-201ENSMUST00000153583 499 ntBASIC3.17□□□□□ -1.9
Ift88Q61371 Gm24847-201ENSMUST00000158032 108 ntBASIC3.17□□□□□ -1.9
Ift88Q61371 Gm24736-201ENSMUST00000158862 130 ntBASIC3.17□□□□□ -1.9
Ift88Q61371 Gm18520-201ENSMUST00000174783 658 ntBASIC3.17□□□□□ -1.9
Ift88Q61371 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC3.17□□□□□ -1.9
Ift88Q61371 Trav5d-2-201ENSMUST00000196107 275 ntBASIC3.17□□□□□ -1.9
Ift88Q61371 Trav5n-2-201ENSMUST00000197136 275 ntBASIC3.17□□□□□ -1.9
Ift88Q61371 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.17□□□□□ -1.9
Ift88Q61371 Gm42594-201ENSMUST00000199511 246 ntBASIC3.17□□□□□ -1.9
Ift88Q61371 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.17□□□□□ -1.9
Ift88Q61371 Gm32222-201ENSMUST00000203296 298 ntBASIC3.17□□□□□ -1.9
Ift88Q61371 Gm36776-201ENSMUST00000207006 203 ntBASIC3.17□□□□□ -1.9
Ift88Q61371 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.17□□□□□ -1.9
Ift88Q61371 Gm25592-201ENSMUST00000082635 131 ntBASIC3.17□□□□□ -1.9
Ift88Q61371 Gm23041-201ENSMUST00000083868 106 ntBASIC3.17□□□□□ -1.9
Ift88Q61371 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ift88Q61371 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.17□□□□□ -1.9
Ift88Q61371 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.16□□□□□ -1.9
Ift88Q61371 Gm13439-201ENSMUST00000117541 409 ntBASIC3.16□□□□□ -1.9
Ift88Q61371 Gm12954-201ENSMUST00000118610 611 ntBASIC3.16□□□□□ -1.9
Ift88Q61371 Gm24005-201ENSMUST00000158459 296 ntBASIC3.16□□□□□ -1.9
Ift88Q61371 Gm25977-201ENSMUST00000158697 85 ntBASIC3.16□□□□□ -1.9
Ift88Q61371 Gm17117-201ENSMUST00000163665 299 ntBASIC3.16□□□□□ -1.9
Ift88Q61371 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC3.16□□□□□ -1.9
Ift88Q61371 Gm20923-201ENSMUST00000190009 319 ntBASIC3.16□□□□□ -1.9
Ift88Q61371 Gm21088-201ENSMUST00000190875 316 ntBASIC3.16□□□□□ -1.9
Ift88Q61371 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Ift88Q61371 Gm43932-201ENSMUST00000204499 52 ntBASIC3.16□□□□□ -1.9
Ift88Q61371 Gm45207-201ENSMUST00000207469 145 ntBASIC3.16□□□□□ -1.9
Ift88Q61371 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.16□□□□□ -1.9
Ift88Q61371 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.16□□□□□ -1.9
Ift88Q61371 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.16□□□□□ -1.9
Ift88Q61371 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.16□□□□□ -1.9
Ift88Q61371 Gm9765-201ENSMUST00000043170 321 ntBASIC3.16□□□□□ -1.9
Ift88Q61371 Gm26327-201ENSMUST00000093724 111 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms