Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CtcfQ61164 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC3.13□□□□□ -1.91
CtcfQ61164 Gm15807-201ENSMUST00000119880 1128 ntBASIC3.13□□□□□ -1.91
CtcfQ61164 Gm15167-201ENSMUST00000121997 187 ntBASIC3.13□□□□□ -1.91
CtcfQ61164 Gm14629-201ENSMUST00000122428 144 ntBASIC3.13□□□□□ -1.91
CtcfQ61164 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.13□□□□□ -1.91
CtcfQ61164 Gm22322-201ENSMUST00000157151 111 ntBASIC3.13□□□□□ -1.91
CtcfQ61164 Gm7582-201ENSMUST00000160831 603 ntBASIC3.13□□□□□ -1.91
CtcfQ61164 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CtcfQ61164 Gm7953-201ENSMUST00000168278 469 ntBASIC3.13□□□□□ -1.91
CtcfQ61164 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.13□□□□□ -1.91
CtcfQ61164 Gm26297-201ENSMUST00000179464 132 ntBASIC3.13□□□□□ -1.91
CtcfQ61164 Gm27470-201ENSMUST00000184070 210 ntBASIC3.13□□□□□ -1.91
CtcfQ61164 Mir7009-201ENSMUST00000184519 64 ntBASIC3.13□□□□□ -1.91
CtcfQ61164 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.13□□□□□ -1.91
CtcfQ61164 Igkv13-64-201ENSMUST00000198143 343 ntBASIC3.13□□□□□ -1.91
CtcfQ61164 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.13□□□□□ -1.91
CtcfQ61164 Gm14429-201ENSMUST00000121881 2024 ntBASIC3.13□□□□□ -1.91
CtcfQ61164 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CtcfQ61164 CT030170.3-201ENSMUST00000221205 1815 ntBASIC3.12□□□□□ -1.91
CtcfQ61164 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.12□□□□□ -1.91
CtcfQ61164 Gm42755-201ENSMUST00000198533 1493 ntBASIC3.12□□□□□ -1.91
CtcfQ61164 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.12□□□□□ -1.91
CtcfQ61164 Gm15010-201ENSMUST00000117153 407 ntBASIC3.12□□□□□ -1.91
CtcfQ61164 Gm14877-201ENSMUST00000119803 478 ntBASIC3.12□□□□□ -1.91
CtcfQ61164 Gm8880-201ENSMUST00000121800 454 ntBASIC3.12□□□□□ -1.91
CtcfQ61164 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.12□□□□□ -1.91
CtcfQ61164 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC3.12□□□□□ -1.91
CtcfQ61164 Gm26278-201ENSMUST00000157098 132 ntBASIC3.12□□□□□ -1.91
CtcfQ61164 Gm22843-201ENSMUST00000157710 134 ntBASIC3.12□□□□□ -1.91
CtcfQ61164 Gm24409-201ENSMUST00000157881 152 ntBASIC3.12□□□□□ -1.91
CtcfQ61164 Gm24577-201ENSMUST00000158580 63 ntBASIC3.12□□□□□ -1.91
CtcfQ61164 Gm44393-201ENSMUST00000197418 138 ntBASIC3.12□□□□□ -1.91
CtcfQ61164 Gm43521-201ENSMUST00000197838 255 ntBASIC3.12□□□□□ -1.91
CtcfQ61164 Gm43107-201ENSMUST00000198729 255 ntBASIC3.12□□□□□ -1.91
CtcfQ61164 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.12□□□□□ -1.91
CtcfQ61164 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC3.12□□□□□ -1.91
CtcfQ61164 Gm44399-201ENSMUST00000205043 226 ntBASIC3.12□□□□□ -1.91
CtcfQ61164 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC3.12□□□□□ -1.91
CtcfQ61164 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.12□□□□□ -1.91
CtcfQ61164 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CtcfQ61164 Gm23412-201ENSMUST00000083017 107 ntBASIC3.12□□□□□ -1.91
CtcfQ61164 Gm25937-201ENSMUST00000083912 107 ntBASIC3.12□□□□□ -1.91
CtcfQ61164 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CtcfQ61164 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CtcfQ61164 Mir466b-8-201ENSMUST00000103883 86 ntBASIC3.11□□□□□ -1.91
CtcfQ61164 Mir743b-201ENSMUST00000104751 77 ntBASIC3.11□□□□□ -1.91
CtcfQ61164 AA413626-201ENSMUST00000121125 494 ntBASIC3.11□□□□□ -1.91
CtcfQ61164 Gm23470-201ENSMUST00000157129 120 ntBASIC3.11□□□□□ -1.91
CtcfQ61164 Gm22099-201ENSMUST00000157925 123 ntBASIC3.11□□□□□ -1.91
CtcfQ61164 Gm23779-201ENSMUST00000157938 64 ntBASIC3.11□□□□□ -1.91
CtcfQ61164 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CtcfQ61164 Gm23725-201ENSMUST00000177876 107 ntBASIC3.11□□□□□ -1.91
CtcfQ61164 Gm9022-202ENSMUST00000183285 483 ntBASIC3.11□□□□□ -1.91
CtcfQ61164 Gm29658-201ENSMUST00000185404 230 ntBASIC3.11□□□□□ -1.91
CtcfQ61164 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.11□□□□□ -1.91
CtcfQ61164 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.11□□□□□ -1.91
CtcfQ61164 Mir466e-201ENSMUST00000198862 84 ntBASIC3.11□□□□□ -1.91
CtcfQ61164 Mir466c-1-201ENSMUST00000200654 84 ntBASIC3.11□□□□□ -1.91
CtcfQ61164 CT572985.2-201ENSMUST00000220496 211 ntBASIC3.11□□□□□ -1.91
CtcfQ61164 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.11□□□□□ -1.91
CtcfQ61164 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.11□□□□□ -1.91
CtcfQ61164 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC3.11□□□□□ -1.91
CtcfQ61164 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CtcfQ61164 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.11□□□□□ -1.91
CtcfQ61164 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CtcfQ61164 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CtcfQ61164 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CtcfQ61164 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CtcfQ61164 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CtcfQ61164 Snord14c-201ENSMUST00000101927 86 ntBASIC3.1□□□□□ -1.91
CtcfQ61164 Gm14448-201ENSMUST00000116383 210 ntBASIC3.1□□□□□ -1.91
CtcfQ61164 Gm25316-201ENSMUST00000116826 118 ntBASIC3.1□□□□□ -1.91
CtcfQ61164 Gm15844-201ENSMUST00000118016 576 ntBASIC3.1□□□□□ -1.91
CtcfQ61164 Gm14013-201ENSMUST00000119006 270 ntBASIC3.1□□□□□ -1.91
CtcfQ61164 Gm22098-201ENSMUST00000157930 85 ntBASIC3.1□□□□□ -1.91
CtcfQ61164 Gm23581-201ENSMUST00000158531 63 ntBASIC3.1□□□□□ -1.91
CtcfQ61164 Gm24736-201ENSMUST00000158862 130 ntBASIC3.1□□□□□ -1.91
CtcfQ61164 Snord93-201ENSMUST00000175580 71 ntBASIC3.1□□□□□ -1.91
CtcfQ61164 Gm27608-201ENSMUST00000184822 162 ntBASIC3.1□□□□□ -1.91
CtcfQ61164 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC3.1□□□□□ -1.91
CtcfQ61164 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.1□□□□□ -1.91
CtcfQ61164 Gm45101-201ENSMUST00000208327 232 ntBASIC3.1□□□□□ -1.91
CtcfQ61164 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.1□□□□□ -1.91
CtcfQ61164 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.1□□□□□ -1.91
CtcfQ61164 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CtcfQ61164 Gm24948-201ENSMUST00000082866 207 ntBASIC3.1□□□□□ -1.91
CtcfQ61164 Gm25793-201ENSMUST00000083287 107 ntBASIC3.1□□□□□ -1.91
CtcfQ61164 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
CtcfQ61164 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CtcfQ61164 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.1□□□□□ -1.91
CtcfQ61164 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
CtcfQ61164 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CtcfQ61164 Gm650-201ENSMUST00000144428 1551 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CtcfQ61164 Gm14073-201ENSMUST00000117344 381 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 Gm13443-201ENSMUST00000120770 555 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 Gm7327-201ENSMUST00000120925 652 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 Gm14287-201ENSMUST00000121060 117 ntBASIC3.09□□□□□ -1.91
CtcfQ61164 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms