Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 AC153541.1-201ENSMUST00000213786 294 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Gm23517-201ENSMUST00000082830 192 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Gm22572-201ENSMUST00000082985 105 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Gm24268-201ENSMUST00000082990 110 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Snord38a-201ENSMUST00000083746 71 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Gm25628-201ENSMUST00000084002 105 ntBASIC1.99□□□□□ -2.09
Usf1Q61069 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Usf1Q61069 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Usf1Q61069 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Usf1Q61069 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
Usf1Q61069 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.98□□□□□ -2.09
Usf1Q61069 Gm15714-201ENSMUST00000117168 250 ntBASIC1.98□□□□□ -2.09
Usf1Q61069 Gm13331-201ENSMUST00000117500 448 ntBASIC1.98□□□□□ -2.09
Usf1Q61069 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.98□□□□□ -2.09
Usf1Q61069 Gm23043-201ENSMUST00000157890 109 ntBASIC1.98□□□□□ -2.09
Usf1Q61069 Gm24846-201ENSMUST00000158033 108 ntBASIC1.98□□□□□ -2.09
Usf1Q61069 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.98□□□□□ -2.09
Usf1Q61069 Gm33354-201ENSMUST00000195448 906 ntBASIC1.98□□□□□ -2.09
Usf1Q61069 Gm43722-201ENSMUST00000196054 124 ntBASIC1.98□□□□□ -2.09
Usf1Q61069 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC1.98□□□□□ -2.09
Usf1Q61069 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.98□□□□□ -2.09
Usf1Q61069 Gm10400-201ENSMUST00000203920 3835 ntBASIC1.98□□□□□ -2.09
Usf1Q61069 Gm44825-201ENSMUST00000207557 150 ntBASIC1.98□□□□□ -2.09
Usf1Q61069 Gm44598-201ENSMUST00000207566 150 ntBASIC1.98□□□□□ -2.09
Usf1Q61069 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.98□□□□□ -2.09
Usf1Q61069 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.98□□□□□ -2.09
Usf1Q61069 AC154484.1-201ENSMUST00000227311 771 ntBASIC1.98□□□□□ -2.09
Usf1Q61069 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.98□□□□□ -2.09
Usf1Q61069 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Usf1Q61069 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.98□□□□□ -2.09
Usf1Q61069 Gm37331-201ENSMUST00000192367 3375 ntBASIC1.98□□□□□ -2.09
Usf1Q61069 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
Usf1Q61069 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.97□□□□□ -2.09
Usf1Q61069 Gm24582-201ENSMUST00000103967 103 ntBASIC1.97□□□□□ -2.09
Usf1Q61069 Gm24889-201ENSMUST00000104388 132 ntBASIC1.97□□□□□ -2.09
Usf1Q61069 Gm22151-201ENSMUST00000116963 58 ntBASIC1.97□□□□□ -2.09
Usf1Q61069 Gm15162-201ENSMUST00000119325 283 ntBASIC1.97□□□□□ -2.09
Usf1Q61069 Gm14770-201ENSMUST00000122197 312 ntBASIC1.97□□□□□ -2.09
Usf1Q61069 Gm13602-201ENSMUST00000122405 493 ntBASIC1.97□□□□□ -2.09
Usf1Q61069 Gm23212-201ENSMUST00000122718 60 ntBASIC1.97□□□□□ -2.09
Usf1Q61069 Gm24237-201ENSMUST00000157790 132 ntBASIC1.97□□□□□ -2.09
Usf1Q61069 Gm24053-201ENSMUST00000158620 105 ntBASIC1.97□□□□□ -2.09
Usf1Q61069 Gm22668-201ENSMUST00000158716 260 ntBASIC1.97□□□□□ -2.09
Usf1Q61069 Gm16561-201ENSMUST00000163001 192 ntBASIC1.97□□□□□ -2.09
Usf1Q61069 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.97□□□□□ -2.09
Usf1Q61069 Mir5101-201ENSMUST00000175181 83 ntBASIC1.97□□□□□ -2.09
Usf1Q61069 Gm27817-201ENSMUST00000184302 233 ntBASIC1.97□□□□□ -2.09
Usf1Q61069 Gm44818-201ENSMUST00000206608 358 ntBASIC1.97□□□□□ -2.09
Usf1Q61069 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.97□□□□□ -2.09
Usf1Q61069 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.97□□□□□ -2.09
Usf1Q61069 Gm26263-201ENSMUST00000083281 164 ntBASIC1.97□□□□□ -2.09
Usf1Q61069 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Usf1Q61069 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
Usf1Q61069 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Usf1Q61069 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.96□□□□□ -2.1
Usf1Q61069 Gm14588-201ENSMUST00000119895 172 ntBASIC1.96□□□□□ -2.1
Usf1Q61069 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.96□□□□□ -2.1
Usf1Q61069 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.96□□□□□ -2.1
Usf1Q61069 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC1.96□□□□□ -2.1
Usf1Q61069 Gm23124-201ENSMUST00000157650 107 ntBASIC1.96□□□□□ -2.1
Usf1Q61069 Gm24394-201ENSMUST00000158141 123 ntBASIC1.96□□□□□ -2.1
Usf1Q61069 Gm24315-201ENSMUST00000177835 127 ntBASIC1.96□□□□□ -2.1
Usf1Q61069 Gm27755-201ENSMUST00000184623 132 ntBASIC1.96□□□□□ -2.1
Usf1Q61069 Gm28648-201ENSMUST00000190092 343 ntBASIC1.96□□□□□ -2.1
Usf1Q61069 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.96□□□□□ -2.1
Usf1Q61069 Mir7232-201ENSMUST00000197929 74 ntBASIC1.96□□□□□ -2.1
Usf1Q61069 Gm43626-201ENSMUST00000198575 162 ntBASIC1.96□□□□□ -2.1
Usf1Q61069 Gm43529-201ENSMUST00000199178 412 ntBASIC1.96□□□□□ -2.1
Usf1Q61069 AC124542.1-201ENSMUST00000205588 908 ntBASIC1.96□□□□□ -2.1
Usf1Q61069 AC134334.1-201ENSMUST00000214277 255 ntBASIC1.96□□□□□ -2.1
Usf1Q61069 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC1.96□□□□□ -2.1
Usf1Q61069 CT025606.1-201ENSMUST00000218273 324 ntBASIC1.96□□□□□ -2.1
Usf1Q61069 Gm29809-201ENSMUST00000218423 493 ntBASIC1.96□□□□□ -2.1
Usf1Q61069 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.96□□□□□ -2.1
Usf1Q61069 Gm6185-201ENSMUST00000193379 3553 ntBASIC1.95□□□□□ -2.1
Usf1Q61069 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Usf1Q61069 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.95□□□□□ -2.1
Usf1Q61069 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
Usf1Q61069 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Usf1Q61069 Gm12053-201ENSMUST00000119022 252 ntBASIC1.95□□□□□ -2.1
Usf1Q61069 Gm7916-201ENSMUST00000120325 456 ntBASIC1.95□□□□□ -2.1
Usf1Q61069 Gm13903-201ENSMUST00000120945 193 ntBASIC1.95□□□□□ -2.1
Usf1Q61069 Gm12872-201ENSMUST00000121835 320 ntBASIC1.95□□□□□ -2.1
Usf1Q61069 Gm25321-201ENSMUST00000122558 102 ntBASIC1.95□□□□□ -2.1
Usf1Q61069 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.95□□□□□ -2.1
Usf1Q61069 Gm22389-201ENSMUST00000158193 301 ntBASIC1.95□□□□□ -2.1
Usf1Q61069 Gm24885-201ENSMUST00000158783 270 ntBASIC1.95□□□□□ -2.1
Usf1Q61069 Gm23196-201ENSMUST00000158806 107 ntBASIC1.95□□□□□ -2.1
Usf1Q61069 Gm37869-201ENSMUST00000193385 595 ntBASIC1.95□□□□□ -2.1
Usf1Q61069 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.95□□□□□ -2.1
Usf1Q61069 Mir3087-201ENSMUST00000199405 56 ntBASIC1.95□□□□□ -2.1
Usf1Q61069 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.95□□□□□ -2.1
Usf1Q61069 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Usf1Q61069 Gm25586-201ENSMUST00000082499 112 ntBASIC1.95□□□□□ -2.1
Usf1Q61069 Gm23040-201ENSMUST00000083869 163 ntBASIC1.95□□□□□ -2.1
Usf1Q61069 Gm45461-201ENSMUST00000211726 4535 ntBASIC1.95□□□□□ -2.1
Usf1Q61069 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Usf1Q61069 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Usf1Q61069 Gm37598-201ENSMUST00000194506 1301 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 135.7 ms