Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm5396-201ENSMUST00000121222 532 ntBASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 Defa-ps5-201ENSMUST00000121541 279 ntBASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 Gm27396-201ENSMUST00000157708 58 ntBASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 Gm22889-201ENSMUST00000158639 58 ntBASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 Gm26005-201ENSMUST00000158802 134 ntBASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 Gm23002-201ENSMUST00000179221 107 ntBASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 Gm27220-201ENSMUST00000183453 262 ntBASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 Gm27540-201ENSMUST00000184950 187 ntBASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 Gm44594-201ENSMUST00000208982 407 ntBASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 Gm3829-201ENSMUST00000222362 619 ntBASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 Mir26a-1-201ENSMUST00000083579 90 ntBASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 Gm26327-201ENSMUST00000093724 111 ntBASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 AC124572.2-201ENSMUST00000218041 5152 ntBASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Scaf1Q5U4C3 AC153967.1-201ENSMUST00000219333 3190 ntBASIC5.22□□□□□ -1.57
Scaf1Q5U4C3 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Scaf1Q5U4C3 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scaf1Q5U4C3 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Scaf1Q5U4C3 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scaf1Q5U4C3 Gm42447-201ENSMUST00000200102 2903 ntBASIC5.22□□□□□ -1.57
Scaf1Q5U4C3 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Scaf1Q5U4C3 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
Scaf1Q5U4C3 Gm26273-201ENSMUST00000104180 131 ntBASIC5.22□□□□□ -1.57
Scaf1Q5U4C3 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scaf1Q5U4C3 Gm11460-201ENSMUST00000118200 361 ntBASIC5.22□□□□□ -1.57
Scaf1Q5U4C3 Gm25720-201ENSMUST00000157503 105 ntBASIC5.22□□□□□ -1.57
Scaf1Q5U4C3 Gm28020-201ENSMUST00000157739 67 ntBASIC5.22□□□□□ -1.57
Scaf1Q5U4C3 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC5.22□□□□□ -1.57
Scaf1Q5U4C3 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC5.22□□□□□ -1.57
Scaf1Q5U4C3 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC5.22□□□□□ -1.57
Scaf1Q5U4C3 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scaf1Q5U4C3 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Scaf1Q5U4C3 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Scaf1Q5U4C3 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
Scaf1Q5U4C3 AC121997.2-203ENSMUST00000228613 4192 ntBASIC5.21□□□□□ -1.57
Scaf1Q5U4C3 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Scaf1Q5U4C3 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Scaf1Q5U4C3 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Scaf1Q5U4C3 Gm11982-201ENSMUST00000121480 314 ntBASIC5.21□□□□□ -1.58
Scaf1Q5U4C3 Gm25105-201ENSMUST00000122477 130 ntBASIC5.21□□□□□ -1.58
Scaf1Q5U4C3 Gm22792-201ENSMUST00000157225 133 ntBASIC5.21□□□□□ -1.58
Scaf1Q5U4C3 Gm24061-201ENSMUST00000157489 120 ntBASIC5.21□□□□□ -1.58
Scaf1Q5U4C3 Gm25436-201ENSMUST00000158275 145 ntBASIC5.21□□□□□ -1.58
Scaf1Q5U4C3 Gm24056-201ENSMUST00000158617 146 ntBASIC5.21□□□□□ -1.58
Scaf1Q5U4C3 Gm28627-201ENSMUST00000186141 453 ntBASIC5.21□□□□□ -1.58
Scaf1Q5U4C3 Gm5329-201ENSMUST00000186898 463 ntBASIC5.21□□□□□ -1.58
Scaf1Q5U4C3 Gm37239-201ENSMUST00000193510 141 ntBASIC5.21□□□□□ -1.58
Scaf1Q5U4C3 Gm6842-201ENSMUST00000211361 390 ntBASIC5.21□□□□□ -1.58
Scaf1Q5U4C3 Gm23723-201ENSMUST00000082996 132 ntBASIC5.21□□□□□ -1.58
Scaf1Q5U4C3 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Scaf1Q5U4C3 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Scaf1Q5U4C3 Neat1-201ENSMUST00000173672 20771 ntBASIC5.2□□□□□ -1.58
Scaf1Q5U4C3 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Scaf1Q5U4C3 Mir1b-201ENSMUST00000117012 122 ntBASIC5.2□□□□□ -1.58
Scaf1Q5U4C3 Gm14803-201ENSMUST00000117163 361 ntBASIC5.2□□□□□ -1.58
Scaf1Q5U4C3 Gm6071-201ENSMUST00000119561 440 ntBASIC5.2□□□□□ -1.58
Scaf1Q5U4C3 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Scaf1Q5U4C3 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC5.2□□□□□ -1.58
Scaf1Q5U4C3 Gm22537-201ENSMUST00000158172 199 ntBASIC5.2□□□□□ -1.58
Scaf1Q5U4C3 Gm22527-201ENSMUST00000158816 106 ntBASIC5.2□□□□□ -1.58
Scaf1Q5U4C3 Gm30674-201ENSMUST00000214523 392 ntBASIC5.2□□□□□ -1.58
Scaf1Q5U4C3 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC5.2□□□□□ -1.58
Scaf1Q5U4C3 AC157476.1-201ENSMUST00000215555 169 ntBASIC5.2□□□□□ -1.58
Scaf1Q5U4C3 AL590503.1-201ENSMUST00000222053 321 ntBASIC5.2□□□□□ -1.58
Scaf1Q5U4C3 Gm23462-201ENSMUST00000083264 104 ntBASIC5.2□□□□□ -1.58
Scaf1Q5U4C3 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Scaf1Q5U4C3 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Scaf1Q5U4C3 Gm43230-201ENSMUST00000200980 2129 ntBASIC5.2□□□□□ -1.58
Scaf1Q5U4C3 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Scaf1Q5U4C3 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Scaf1Q5U4C3 Gm37402-201ENSMUST00000194525 5000 ntBASIC5.19□□□□□ -1.58
Scaf1Q5U4C3 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Scaf1Q5U4C3 Trav20-201ENSMUST00000142754 347 ntBASIC5.19□□□□□ -1.58
Scaf1Q5U4C3 Gm23589-201ENSMUST00000157660 105 ntBASIC5.19□□□□□ -1.58
Scaf1Q5U4C3 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC5.19□□□□□ -1.58
Scaf1Q5U4C3 Mir6385-201ENSMUST00000184295 105 ntBASIC5.19□□□□□ -1.58
Scaf1Q5U4C3 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC5.19□□□□□ -1.58
Scaf1Q5U4C3 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC5.19□□□□□ -1.58
Scaf1Q5U4C3 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC5.19□□□□□ -1.58
Scaf1Q5U4C3 AC155923.1-201ENSMUST00000215676 356 ntBASIC5.19□□□□□ -1.58
Scaf1Q5U4C3 AC173482.5-201ENSMUST00000224181 327 ntBASIC5.19□□□□□ -1.58
Scaf1Q5U4C3 AC134577.1-201ENSMUST00000227572 295 ntBASIC5.19□□□□□ -1.58
Scaf1Q5U4C3 Mir323-201ENSMUST00000083683 86 ntBASIC5.19□□□□□ -1.58
Scaf1Q5U4C3 Gm45884-201ENSMUST00000209540 3416 ntBASIC5.19□□□□□ -1.58
Scaf1Q5U4C3 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Scaf1Q5U4C3 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 AC156025.1-201ENSMUST00000223597 3551 ntBASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 Gm24067-201ENSMUST00000104514 85 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 114 ms