Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm14945-201ENSMUST00000119556 1118 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm23328-201ENSMUST00000157418 132 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm26173-201ENSMUST00000158416 136 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm24056-201ENSMUST00000158617 146 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm36966-201ENSMUST00000192217 413 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm31849-201ENSMUST00000220306 375 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 AC156574.2-201ENSMUST00000228023 282 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm24622-201ENSMUST00000082619 162 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm23650-201ENSMUST00000083355 70 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm5596-201ENSMUST00000207988 2421 ntBASIC1.37□□□□□ -2.19
Col27a1Q5QNQ9 Gm14868-201ENSMUST00000117840 216 ntBASIC1.37□□□□□ -2.19
Col27a1Q5QNQ9 Gm11845-201ENSMUST00000117886 327 ntBASIC1.37□□□□□ -2.19
Col27a1Q5QNQ9 Gm4732-201ENSMUST00000118778 473 ntBASIC1.37□□□□□ -2.19
Col27a1Q5QNQ9 Gm15659-201ENSMUST00000118881 341 ntBASIC1.37□□□□□ -2.19
Col27a1Q5QNQ9 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.37□□□□□ -2.19
Col27a1Q5QNQ9 Gm23111-201ENSMUST00000122652 105 ntBASIC1.37□□□□□ -2.19
Col27a1Q5QNQ9 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.37□□□□□ -2.19
Col27a1Q5QNQ9 Gm24716-201ENSMUST00000157524 104 ntBASIC1.37□□□□□ -2.19
Col27a1Q5QNQ9 Gm26029-201ENSMUST00000158659 132 ntBASIC1.37□□□□□ -2.19
Col27a1Q5QNQ9 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Col27a1Q5QNQ9 Gm28058-201ENSMUST00000186421 264 ntBASIC1.37□□□□□ -2.19
Col27a1Q5QNQ9 Gm23370-202ENSMUST00000197008 129 ntBASIC1.37□□□□□ -2.19
Col27a1Q5QNQ9 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.37□□□□□ -2.19
Col27a1Q5QNQ9 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.37□□□□□ -2.19
Col27a1Q5QNQ9 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.37□□□□□ -2.19
Col27a1Q5QNQ9 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.37□□□□□ -2.19
Col27a1Q5QNQ9 Gm26126-201ENSMUST00000083188 164 ntBASIC1.37□□□□□ -2.19
Col27a1Q5QNQ9 Gm25257-201ENSMUST00000083907 110 ntBASIC1.37□□□□□ -2.19
Col27a1Q5QNQ9 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm45262-201ENSMUST00000209917 1463 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 AC162910.1-201ENSMUST00000221219 1723 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm22496-201ENSMUST00000104493 88 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm14594-201ENSMUST00000118052 537 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm14590-201ENSMUST00000118934 537 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm15067-201ENSMUST00000119534 156 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm15029-201ENSMUST00000119742 199 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm13153-201ENSMUST00000120969 637 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm25175-201ENSMUST00000178712 79 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm14596-201ENSMUST00000180268 537 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm14595-201ENSMUST00000180335 537 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm37000-201ENSMUST00000193058 428 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm38268-201ENSMUST00000195813 193 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm43978-201ENSMUST00000203491 451 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm43955-201ENSMUST00000204332 142 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 AC159476.2-201ENSMUST00000216221 418 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 AC125464.1-201ENSMUST00000228013 512 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 AC102291.2-201ENSMUST00000228083 367 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Mir211-201ENSMUST00000083651 106 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Mir16-2-201ENSMUST00000083672 95 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm14852-201ENSMUST00000120065 647 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm12639-201ENSMUST00000121400 493 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm13602-201ENSMUST00000122405 493 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm15281-201ENSMUST00000125181 351 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm23981-201ENSMUST00000157136 106 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm23588-201ENSMUST00000157659 99 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm27245-201ENSMUST00000184385 376 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm29516-201ENSMUST00000190402 468 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Mir19a-201ENSMUST00000083482 82 ntBASIC1.36□□□□□ -2.19
Col27a1Q5QNQ9 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Gm14428-201ENSMUST00000120408 822 ntBASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Gm14366-201ENSMUST00000121970 730 ntBASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Gm22603-201ENSMUST00000157603 96 ntBASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Gm25706-201ENSMUST00000157828 247 ntBASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Gm24304-201ENSMUST00000177635 107 ntBASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Gm21744-201ENSMUST00000178403 662 ntBASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Gm21171-201ENSMUST00000180048 673 ntBASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Mir6351-201ENSMUST00000183826 99 ntBASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Gm29413-201ENSMUST00000186019 880 ntBASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Gm28700-201ENSMUST00000187614 579 ntBASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Gm29639-201ENSMUST00000188375 580 ntBASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Gm28843-201ENSMUST00000189198 678 ntBASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Gm29546-201ENSMUST00000191171 678 ntBASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Gm3724-201ENSMUST00000197957 349 ntBASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Mir219b-201ENSMUST00000198317 65 ntBASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Gm10297-201ENSMUST00000207136 651 ntBASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 AC164629.1-201ENSMUST00000220250 1113 ntBASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 AC123656.2-201ENSMUST00000226726 227 ntBASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Gm24165-201ENSMUST00000082718 128 ntBASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.35□□□□□ -2.19
Col27a1Q5QNQ9 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Col27a1Q5QNQ9 Gm8217-201ENSMUST00000119136 465 ntBASIC1.34□□□□□ -2.19
Col27a1Q5QNQ9 Gm6568-201ENSMUST00000122274 697 ntBASIC1.34□□□□□ -2.19
Col27a1Q5QNQ9 n-R5s216-201ENSMUST00000122755 112 ntBASIC1.34□□□□□ -2.19
Col27a1Q5QNQ9 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Col27a1Q5QNQ9 Gm23718-201ENSMUST00000157350 307 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms