Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm19441-201ENSMUST00000221545 330 ntBASIC2.07□□□□□ -2.08
Usp28Q5I043 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Usp28Q5I043 Gm23727-201ENSMUST00000083352 164 ntBASIC2.07□□□□□ -2.08
Usp28Q5I043 Gm23247-201ENSMUST00000083373 107 ntBASIC2.07□□□□□ -2.08
Usp28Q5I043 Gm25859-201ENSMUST00000083710 91 ntBASIC2.07□□□□□ -2.08
Usp28Q5I043 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Usp28Q5I043 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.07□□□□□ -2.08
Usp28Q5I043 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm23422-201ENSMUST00000102000 107 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm14894-201ENSMUST00000117170 270 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm12779-201ENSMUST00000121496 143 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm13433-201ENSMUST00000121701 240 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm23469-201ENSMUST00000157131 104 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm22555-201ENSMUST00000157801 62 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm25051-201ENSMUST00000158602 249 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm26652-202ENSMUST00000181672 475 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm28000-201ENSMUST00000184380 85 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm5329-201ENSMUST00000186898 463 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm29184-201ENSMUST00000190038 334 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm7837-201ENSMUST00000190873 412 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm37778-201ENSMUST00000191732 190 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm37658-201ENSMUST00000192672 315 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm37449-201ENSMUST00000193016 270 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm8747-201ENSMUST00000195392 751 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm18658-201ENSMUST00000195558 270 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.06□□□□□ -2.08
Usp28Q5I043 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm19140-201ENSMUST00000209790 421 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 CT010480.5-201ENSMUST00000225026 217 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm25853-201ENSMUST00000082793 132 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Gm22683-201ENSMUST00000082854 137 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Mir222-201ENSMUST00000083537 79 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.06□□□□□ -2.08
Usp28Q5I043 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Usp28Q5I043 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
Usp28Q5I043 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC2.05□□□□□ -2.08
Usp28Q5I043 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.05□□□□□ -2.08
Usp28Q5I043 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.05□□□□□ -2.08
Usp28Q5I043 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.05□□□□□ -2.08
Usp28Q5I043 Gm24716-201ENSMUST00000157524 104 ntBASIC2.05□□□□□ -2.08
Usp28Q5I043 Gm22843-201ENSMUST00000157710 134 ntBASIC2.05□□□□□ -2.08
Usp28Q5I043 Gm4468-201ENSMUST00000170206 294 ntBASIC2.05□□□□□ -2.08
Usp28Q5I043 Gm20543-201ENSMUST00000174200 726 ntBASIC2.05□□□□□ -2.08
Usp28Q5I043 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC2.05□□□□□ -2.08
Usp28Q5I043 Gm20689-201ENSMUST00000176033 279 ntBASIC2.05□□□□□ -2.08
Usp28Q5I043 Gm8151-201ENSMUST00000184817 871 ntBASIC2.05□□□□□ -2.08
Usp28Q5I043 Gm45013-201ENSMUST00000206883 178 ntBASIC2.05□□□□□ -2.08
Usp28Q5I043 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.05□□□□□ -2.08
Usp28Q5I043 AC162387.1-201ENSMUST00000213369 213 ntBASIC2.05□□□□□ -2.08
Usp28Q5I043 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.05□□□□□ -2.08
Usp28Q5I043 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Usp28Q5I043 Gm10298-201ENSMUST00000074801 265 ntBASIC2.05□□□□□ -2.08
Usp28Q5I043 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Usp28Q5I043 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Usp28Q5I043 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Usp28Q5I043 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.05□□□□□ -2.08
Usp28Q5I043 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
Usp28Q5I043 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Usp28Q5I043 Gm6954-201ENSMUST00000117416 225 ntBASIC2.04□□□□□ -2.08
Usp28Q5I043 Gm650-201ENSMUST00000144428 1551 ntBASIC2.04□□□□□ -2.08
Usp28Q5I043 Gm24783-201ENSMUST00000157639 100 ntBASIC2.04□□□□□ -2.08
Usp28Q5I043 Gm22554-201ENSMUST00000157798 147 ntBASIC2.04□□□□□ -2.08
Usp28Q5I043 Gm24997-201ENSMUST00000157910 105 ntBASIC2.04□□□□□ -2.08
Usp28Q5I043 Gm17062-201ENSMUST00000166987 461 ntBASIC2.04□□□□□ -2.08
Usp28Q5I043 Gm23933-201ENSMUST00000178405 79 ntBASIC2.04□□□□□ -2.08
Usp28Q5I043 Gm23862-201ENSMUST00000180342 94 ntBASIC2.04□□□□□ -2.08
Usp28Q5I043 Gm38261-201ENSMUST00000192608 316 ntBASIC2.04□□□□□ -2.08
Usp28Q5I043 Gm38167-201ENSMUST00000195704 1178 ntBASIC2.04□□□□□ -2.08
Usp28Q5I043 Gm23370-202ENSMUST00000197008 129 ntBASIC2.04□□□□□ -2.08
Usp28Q5I043 Gm43431-201ENSMUST00000198577 340 ntBASIC2.04□□□□□ -2.08
Usp28Q5I043 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.04□□□□□ -2.08
Usp28Q5I043 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Usp28Q5I043 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Usp28Q5I043 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.04□□□□□ -2.08
Usp28Q5I043 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Usp28Q5I043 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.04□□□□□ -2.08
Usp28Q5I043 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.04□□□□□ -2.08
Usp28Q5I043 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Usp28Q5I043 Gm24044-201ENSMUST00000083107 156 ntBASIC2.04□□□□□ -2.08
Usp28Q5I043 Gm23097-201ENSMUST00000083448 105 ntBASIC2.04□□□□□ -2.08
Usp28Q5I043 Gm23093-201ENSMUST00000083450 102 ntBASIC2.04□□□□□ -2.08
Usp28Q5I043 Gm26166-201ENSMUST00000083788 107 ntBASIC2.04□□□□□ -2.08
Usp28Q5I043 Gm26327-201ENSMUST00000093724 111 ntBASIC2.04□□□□□ -2.08
Usp28Q5I043 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Usp28Q5I043 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Usp28Q5I043 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Usp28Q5I043 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Usp28Q5I043 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm13355-201ENSMUST00000117996 317 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm12513-201ENSMUST00000118617 352 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm14852-201ENSMUST00000120065 647 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm7916-201ENSMUST00000120325 456 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm26256-201ENSMUST00000122499 186 ntBASIC2.03□□□□□ -2.08
Usp28Q5I043 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.03□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms