Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm44041-201ENSMUST00000203678 396 ntBASIC1.79□□□□□ -2.12
Shank3Q4ACU6 Gm34701-202ENSMUST00000204685 360 ntBASIC1.79□□□□□ -2.12
Shank3Q4ACU6 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
Shank3Q4ACU6 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.79□□□□□ -2.12
Shank3Q4ACU6 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.79□□□□□ -2.12
Shank3Q4ACU6 Gm22591-201ENSMUST00000104243 106 ntBASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Gm25563-201ENSMUST00000104603 74 ntBASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Gm22560-201ENSMUST00000157332 120 ntBASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Gm24962-201ENSMUST00000157917 109 ntBASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Gm26271-201ENSMUST00000158349 104 ntBASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Gm25451-201ENSMUST00000177832 121 ntBASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Gm22131-201ENSMUST00000178415 94 ntBASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Gm27248-201ENSMUST00000184004 166 ntBASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Mir6382-201ENSMUST00000184055 110 ntBASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Gm27520-201ENSMUST00000184872 81 ntBASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Gm28956-201ENSMUST00000189047 427 ntBASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Gm28951-201ENSMUST00000190742 313 ntBASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Gm32033-201ENSMUST00000193483 339 ntBASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Gm6059-201ENSMUST00000196903 340 ntBASIC1.78□□□□□ -2.12
Shank3Q4ACU6 AC138667.2-201ENSMUST00000224880 598 ntBASIC1.78□□□□□ -2.12
Shank3Q4ACU6 AC170810.3-201ENSMUST00000226177 374 ntBASIC1.78□□□□□ -2.12
Shank3Q4ACU6 AC166344.2-201ENSMUST00000226747 374 ntBASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Gm18751-201ENSMUST00000185777 2013 ntBASIC1.78□□□□□ -2.12
Shank3Q4ACU6 Gm23744-201ENSMUST00000104231 149 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm14359-201ENSMUST00000118883 424 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm13541-201ENSMUST00000119519 283 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm14945-201ENSMUST00000119556 1118 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm14360-201ENSMUST00000120670 393 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm9498-201ENSMUST00000140849 291 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm22839-201ENSMUST00000158436 304 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm9593-201ENSMUST00000166034 469 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm8532-201ENSMUST00000179174 461 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm24306-201ENSMUST00000180229 79 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm28560-201ENSMUST00000186091 315 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm28334-201ENSMUST00000186653 315 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm28495-201ENSMUST00000188452 315 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm28232-201ENSMUST00000188683 315 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm28481-201ENSMUST00000189231 315 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm29059-201ENSMUST00000191534 315 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm37765-201ENSMUST00000192395 315 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm37237-201ENSMUST00000192893 315 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm36968-201ENSMUST00000193737 315 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm38290-201ENSMUST00000195238 315 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm44990-201ENSMUST00000203922 217 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm32300-201ENSMUST00000221735 515 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm22496-201ENSMUST00000104493 88 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 n-R5s26-201ENSMUST00000104601 122 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm22091-201ENSMUST00000116908 127 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm14594-201ENSMUST00000118052 537 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm14590-201ENSMUST00000118934 537 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm13356-201ENSMUST00000121678 335 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 n-R5s216-201ENSMUST00000122755 112 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm25283-201ENSMUST00000157272 77 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm25175-201ENSMUST00000178712 79 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm24713-201ENSMUST00000178850 107 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm25448-201ENSMUST00000180065 107 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm14596-201ENSMUST00000180268 537 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm14595-201ENSMUST00000180335 537 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm27582-201ENSMUST00000184084 126 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm19202-201ENSMUST00000198096 808 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm42857-201ENSMUST00000200823 339 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm44135-201ENSMUST00000205221 368 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 AC192334.2-201ENSMUST00000223087 1091 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 AC122341.1-201ENSMUST00000227291 560 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 AC133076.1-201ENSMUST00000228074 484 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Gm23741-201ENSMUST00000097237 171 ntBASIC1.77□□□□□ -2.13
Shank3Q4ACU6 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
Shank3Q4ACU6 Gm11845-201ENSMUST00000117886 327 ntBASIC1.76□□□□□ -2.13
Shank3Q4ACU6 Gm6568-201ENSMUST00000122274 697 ntBASIC1.76□□□□□ -2.13
Shank3Q4ACU6 Gm25715-201ENSMUST00000158627 125 ntBASIC1.76□□□□□ -2.13
Shank3Q4ACU6 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Shank3Q4ACU6 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Shank3Q4ACU6 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Shank3Q4ACU6 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Shank3Q4ACU6 Gm27755-201ENSMUST00000184623 132 ntBASIC1.76□□□□□ -2.13
Shank3Q4ACU6 Gm38333-201ENSMUST00000193608 604 ntBASIC1.76□□□□□ -2.13
Shank3Q4ACU6 Gm37743-201ENSMUST00000194645 376 ntBASIC1.76□□□□□ -2.13
Shank3Q4ACU6 Gm23645-201ENSMUST00000083228 108 ntBASIC1.76□□□□□ -2.13
Shank3Q4ACU6 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
Shank3Q4ACU6 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
Shank3Q4ACU6 Gm14428-201ENSMUST00000120408 822 ntBASIC1.75□□□□□ -2.13
Shank3Q4ACU6 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC1.75□□□□□ -2.13
Shank3Q4ACU6 Gm22843-201ENSMUST00000157710 134 ntBASIC1.75□□□□□ -2.13
Shank3Q4ACU6 Gm23078-201ENSMUST00000157848 148 ntBASIC1.75□□□□□ -2.13
Shank3Q4ACU6 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.75□□□□□ -2.13
Shank3Q4ACU6 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC1.75□□□□□ -2.13
Shank3Q4ACU6 Gm24925-201ENSMUST00000178157 107 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 138.1 ms