Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm17906-201ENSMUST00000202480 901 ntBASIC2.06□□□□□ -2.08
Upf3aQ3ULJ3 Gm19140-201ENSMUST00000209790 421 ntBASIC2.06□□□□□ -2.08
Upf3aQ3ULJ3 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.06□□□□□ -2.08
Upf3aQ3ULJ3 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.06□□□□□ -2.08
Upf3aQ3ULJ3 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Upf3aQ3ULJ3 Gm25124-201ENSMUST00000083345 164 ntBASIC2.06□□□□□ -2.08
Upf3aQ3ULJ3 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.06□□□□□ -2.08
Upf3aQ3ULJ3 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 Gm13331-201ENSMUST00000117500 448 ntBASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 Gm11845-201ENSMUST00000117886 327 ntBASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 Gm13804-201ENSMUST00000119552 172 ntBASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 Gm12721-201ENSMUST00000120621 268 ntBASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 Gm12096-201ENSMUST00000121149 829 ntBASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 Gm23059-201ENSMUST00000158978 107 ntBASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 Mir7j-201ENSMUST00000184427 122 ntBASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 Mir7217-201ENSMUST00000200304 62 ntBASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 Gm44524-201ENSMUST00000203899 271 ntBASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 Gm44818-201ENSMUST00000206608 358 ntBASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 AC116726.2-201ENSMUST00000217629 986 ntBASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 Gm25257-201ENSMUST00000083907 110 ntBASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Upf3aQ3ULJ3 Gm14670-201ENSMUST00000117327 337 ntBASIC2.04□□□□□ -2.08
Upf3aQ3ULJ3 Gm5396-201ENSMUST00000121222 532 ntBASIC2.04□□□□□ -2.08
Upf3aQ3ULJ3 Gm6568-201ENSMUST00000122274 697 ntBASIC2.04□□□□□ -2.08
Upf3aQ3ULJ3 Gm14629-201ENSMUST00000122428 144 ntBASIC2.04□□□□□ -2.08
Upf3aQ3ULJ3 Gm24857-201ENSMUST00000158061 310 ntBASIC2.04□□□□□ -2.08
Upf3aQ3ULJ3 Mir6335-201ENSMUST00000184081 98 ntBASIC2.04□□□□□ -2.08
Upf3aQ3ULJ3 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.04□□□□□ -2.08
Upf3aQ3ULJ3 Gm18185-201ENSMUST00000186725 667 ntBASIC2.04□□□□□ -2.08
Upf3aQ3ULJ3 Gm43286-201ENSMUST00000197420 424 ntBASIC2.04□□□□□ -2.08
Upf3aQ3ULJ3 Gm42164-201ENSMUST00000198881 379 ntBASIC2.04□□□□□ -2.08
Upf3aQ3ULJ3 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Upf3aQ3ULJ3 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC2.04□□□□□ -2.08
Upf3aQ3ULJ3 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC2.04□□□□□ -2.08
Upf3aQ3ULJ3 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.04□□□□□ -2.08
Upf3aQ3ULJ3 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC2.04□□□□□ -2.08
Upf3aQ3ULJ3 Gm7065-201ENSMUST00000222150 474 ntBASIC2.04□□□□□ -2.08
Upf3aQ3ULJ3 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.04□□□□□ -2.08
Upf3aQ3ULJ3 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm24049-201ENSMUST00000102409 100 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Mir450-2-201ENSMUST00000102444 69 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm22771-201ENSMUST00000104449 91 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm13432-201ENSMUST00000118861 241 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm15162-201ENSMUST00000119325 283 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm15807-201ENSMUST00000119880 1128 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm13720-201ENSMUST00000120741 196 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm15077-201ENSMUST00000122344 362 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm13602-201ENSMUST00000122405 493 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm24908-201ENSMUST00000157294 127 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm22556-201ENSMUST00000157803 100 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm22851-201ENSMUST00000178741 94 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm25074-201ENSMUST00000178782 94 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm24638-201ENSMUST00000179807 132 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Mir7678-201ENSMUST00000185076 71 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm29429-201ENSMUST00000187071 121 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm37869-201ENSMUST00000193385 595 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm42647-201ENSMUST00000195939 459 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Mir3087-201ENSMUST00000199405 56 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm44459-201ENSMUST00000203926 160 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm7039-201ENSMUST00000205138 346 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 AC114916.1-201ENSMUST00000228465 494 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm26446-201ENSMUST00000082455 103 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm24150-201ENSMUST00000082759 104 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm25402-201ENSMUST00000082966 131 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Gm24268-201ENSMUST00000082990 110 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Snora69-201ENSMUST00000083708 131 ntBASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Upf3aQ3ULJ3 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Upf3aQ3ULJ3 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Gm11835-201ENSMUST00000120635 663 ntBASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Gm25339-201ENSMUST00000157458 232 ntBASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Gm23124-201ENSMUST00000157650 107 ntBASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Gm22527-201ENSMUST00000158816 106 ntBASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Gm21744-201ENSMUST00000178403 662 ntBASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Gm21171-201ENSMUST00000180048 673 ntBASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Gm29413-201ENSMUST00000186019 880 ntBASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Upf3aQ3ULJ3 Gm28700-201ENSMUST00000187614 579 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms