Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Limch1Q3UH68 Gm37001-201ENSMUST00000193377 190 ntBASIC4.35□□□□□ -1.71
Limch1Q3UH68 Gm18188-201ENSMUST00000219386 478 ntBASIC4.35□□□□□ -1.71
Limch1Q3UH68 AC166830.2-201ENSMUST00000225821 196 ntBASIC4.35□□□□□ -1.71
Limch1Q3UH68 Gm25081-201ENSMUST00000082534 108 ntBASIC4.35□□□□□ -1.71
Limch1Q3UH68 Gm24147-201ENSMUST00000082763 144 ntBASIC4.35□□□□□ -1.71
Limch1Q3UH68 Gm26166-201ENSMUST00000083788 107 ntBASIC4.35□□□□□ -1.71
Limch1Q3UH68 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Limch1Q3UH68 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Limch1Q3UH68 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.35□□□□□ -1.71
Limch1Q3UH68 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Limch1Q3UH68 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Limch1Q3UH68 Gm37672-201ENSMUST00000192682 4014 ntBASIC4.34□□□□□ -1.71
Limch1Q3UH68 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Limch1Q3UH68 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Limch1Q3UH68 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Limch1Q3UH68 Gm13992-201ENSMUST00000120558 156 ntBASIC4.34□□□□□ -1.71
Limch1Q3UH68 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.34□□□□□ -1.71
Limch1Q3UH68 Gm26026-201ENSMUST00000122726 123 ntBASIC4.34□□□□□ -1.71
Limch1Q3UH68 Gm25223-201ENSMUST00000158200 110 ntBASIC4.34□□□□□ -1.71
Limch1Q3UH68 Gm27851-201ENSMUST00000183529 63 ntBASIC4.34□□□□□ -1.71
Limch1Q3UH68 Mir6715-201ENSMUST00000184990 57 ntBASIC4.34□□□□□ -1.71
Limch1Q3UH68 Gm36964-201ENSMUST00000191876 198 ntBASIC4.34□□□□□ -1.71
Limch1Q3UH68 Gm10400-201ENSMUST00000203920 3835 ntBASIC4.34□□□□□ -1.71
Limch1Q3UH68 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.34□□□□□ -1.71
Limch1Q3UH68 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.34□□□□□ -1.71
Limch1Q3UH68 AC165284.1-201ENSMUST00000228614 458 ntBASIC4.34□□□□□ -1.71
Limch1Q3UH68 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Limch1Q3UH68 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
Limch1Q3UH68 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Limch1Q3UH68 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Limch1Q3UH68 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.33□□□□□ -1.72
Limch1Q3UH68 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Limch1Q3UH68 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Limch1Q3UH68 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Limch1Q3UH68 AC152159.1-201ENSMUST00000226719 2769 ntBASIC4.33□□□□□ -1.72
Limch1Q3UH68 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
Limch1Q3UH68 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Limch1Q3UH68 Gm24132-201ENSMUST00000104745 91 ntBASIC4.33□□□□□ -1.72
Limch1Q3UH68 Gm14782-201ENSMUST00000120151 195 ntBASIC4.33□□□□□ -1.72
Limch1Q3UH68 Gm11204-201ENSMUST00000122438 147 ntBASIC4.33□□□□□ -1.72
Limch1Q3UH68 Mir1942-201ENSMUST00000157274 63 ntBASIC4.33□□□□□ -1.72
Limch1Q3UH68 Gm22989-201ENSMUST00000158313 86 ntBASIC4.33□□□□□ -1.72
Limch1Q3UH68 Gm25369-201ENSMUST00000158848 132 ntBASIC4.33□□□□□ -1.72
Limch1Q3UH68 Gm26200-201ENSMUST00000180273 79 ntBASIC4.33□□□□□ -1.72
Limch1Q3UH68 Gm27952-201ENSMUST00000184748 105 ntBASIC4.33□□□□□ -1.72
Limch1Q3UH68 Gm1833-201ENSMUST00000191608 682 ntBASIC4.33□□□□□ -1.72
Limch1Q3UH68 Gm37431-201ENSMUST00000195102 111 ntBASIC4.33□□□□□ -1.72
Limch1Q3UH68 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.33□□□□□ -1.72
Limch1Q3UH68 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Limch1Q3UH68 Gm46993-201ENSMUST00000220708 259 ntBASIC4.33□□□□□ -1.72
Limch1Q3UH68 AC100209.2-201ENSMUST00000224461 451 ntBASIC4.33□□□□□ -1.72
Limch1Q3UH68 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Limch1Q3UH68 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Limch1Q3UH68 Gm37296-201ENSMUST00000192728 2922 ntBASIC4.33□□□□□ -1.72
Limch1Q3UH68 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Limch1Q3UH68 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.33□□□□□ -1.72
Limch1Q3UH68 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Limch1Q3UH68 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.32□□□□□ -1.72
Limch1Q3UH68 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Limch1Q3UH68 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.32□□□□□ -1.72
Limch1Q3UH68 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.32□□□□□ -1.72
Limch1Q3UH68 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.32□□□□□ -1.72
Limch1Q3UH68 Gm25272-201ENSMUST00000104293 128 ntBASIC4.32□□□□□ -1.72
Limch1Q3UH68 Gm26018-201ENSMUST00000104406 128 ntBASIC4.32□□□□□ -1.72
Limch1Q3UH68 Gm24586-201ENSMUST00000116695 89 ntBASIC4.32□□□□□ -1.72
Limch1Q3UH68 Gm14593-201ENSMUST00000119948 294 ntBASIC4.32□□□□□ -1.72
Limch1Q3UH68 Gm14687-201ENSMUST00000120206 363 ntBASIC4.32□□□□□ -1.72
Limch1Q3UH68 Gm14775-201ENSMUST00000122089 310 ntBASIC4.32□□□□□ -1.72
Limch1Q3UH68 Gm8840-201ENSMUST00000122454 386 ntBASIC4.32□□□□□ -1.72
Limch1Q3UH68 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC4.32□□□□□ -1.72
Limch1Q3UH68 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.32□□□□□ -1.72
Limch1Q3UH68 Gm23168-201ENSMUST00000157156 143 ntBASIC4.32□□□□□ -1.72
Limch1Q3UH68 Gm25115-201ENSMUST00000157187 140 ntBASIC4.32□□□□□ -1.72
Limch1Q3UH68 Gm22890-201ENSMUST00000158642 144 ntBASIC4.32□□□□□ -1.72
Limch1Q3UH68 Gm28848-201ENSMUST00000189984 168 ntBASIC4.32□□□□□ -1.72
Limch1Q3UH68 Gm5002-201ENSMUST00000207145 223 ntBASIC4.32□□□□□ -1.72
Limch1Q3UH68 AC157476.1-201ENSMUST00000215555 169 ntBASIC4.32□□□□□ -1.72
Limch1Q3UH68 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.32□□□□□ -1.72
Limch1Q3UH68 AC154262.1-201ENSMUST00000225976 286 ntBASIC4.32□□□□□ -1.72
Limch1Q3UH68 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.32□□□□□ -1.72
Limch1Q3UH68 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Limch1Q3UH68 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Limch1Q3UH68 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
Limch1Q3UH68 Gm4746-201ENSMUST00000120395 2406 ntBASIC4.31□□□□□ -1.72
Limch1Q3UH68 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.31□□□□□ -1.72
Limch1Q3UH68 Gm23063-201ENSMUST00000102350 93 ntBASIC4.31□□□□□ -1.72
Limch1Q3UH68 Gm24127-201ENSMUST00000104110 130 ntBASIC4.31□□□□□ -1.72
Limch1Q3UH68 Gm14629-201ENSMUST00000122428 144 ntBASIC4.31□□□□□ -1.72
Limch1Q3UH68 Gm25914-201ENSMUST00000157618 153 ntBASIC4.31□□□□□ -1.72
Limch1Q3UH68 Gm37617-201ENSMUST00000194309 159 ntBASIC4.31□□□□□ -1.72
Limch1Q3UH68 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.31□□□□□ -1.72
Limch1Q3UH68 Gm44337-201ENSMUST00000196553 114 ntBASIC4.31□□□□□ -1.72
Limch1Q3UH68 Gm20144-201ENSMUST00000203031 165 ntBASIC4.31□□□□□ -1.72
Limch1Q3UH68 AC154994.1-201ENSMUST00000217395 302 ntBASIC4.31□□□□□ -1.72
Limch1Q3UH68 Gm40810-201ENSMUST00000219149 253 ntBASIC4.31□□□□□ -1.72
Limch1Q3UH68 AC121942.2-201ENSMUST00000223824 600 ntBASIC4.31□□□□□ -1.72
Limch1Q3UH68 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.31□□□□□ -1.72
Limch1Q3UH68 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Limch1Q3UH68 Gm45662-201ENSMUST00000210054 2098 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 103.9 ms