Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 AC140477.1-201ENSMUST00000222354 246 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Gm22577-201ENSMUST00000083731 109 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Gm25257-201ENSMUST00000083907 110 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Gm23472-201ENSMUST00000101806 191 ntBASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Gm22517-201ENSMUST00000158265 136 ntBASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Gm22257-201ENSMUST00000158687 301 ntBASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Gm23005-201ENSMUST00000158950 136 ntBASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Gm20543-201ENSMUST00000174200 726 ntBASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Gm24497-201ENSMUST00000177868 191 ntBASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Gm25939-201ENSMUST00000179876 191 ntBASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Gm27399-201ENSMUST00000184250 78 ntBASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Mir6371-201ENSMUST00000184470 111 ntBASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Gm5034-201ENSMUST00000199115 634 ntBASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Gm44336-201ENSMUST00000203696 468 ntBASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 AC124346.1-201ENSMUST00000218539 364 ntBASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Gm19326-201ENSMUST00000219818 326 ntBASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Gm23444-201ENSMUST00000082922 191 ntBASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Gm23042-201ENSMUST00000083866 101 ntBASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Olfr575-201ENSMUST00000084812 957 ntBASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Trafd1Q3UDK1 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Gm14823-201ENSMUST00000117698 238 ntBASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Gm11420-201ENSMUST00000120047 402 ntBASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Gm14629-201ENSMUST00000122428 144 ntBASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Gm23000-201ENSMUST00000157083 139 ntBASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Gm23559-201ENSMUST00000157824 103 ntBASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Gm22668-201ENSMUST00000158716 260 ntBASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Gm19932-201ENSMUST00000177033 313 ntBASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Gm23725-201ENSMUST00000177876 107 ntBASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Mir6402-201ENSMUST00000183406 80 ntBASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Gm36953-201ENSMUST00000195295 268 ntBASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Mir497-201ENSMUST00000200557 84 ntBASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Gm30155-201ENSMUST00000223458 339 ntBASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Gm25475-201ENSMUST00000082825 180 ntBASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Gm24037-201ENSMUST00000082871 180 ntBASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Snord104-201ENSMUST00000083192 70 ntBASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Mir137-201ENSMUST00000083635 73 ntBASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trafd1Q3UDK1 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Gm19428-201ENSMUST00000220512 1995 ntBASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Gm13475-201ENSMUST00000119290 234 ntBASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Gm12155-201ENSMUST00000121267 160 ntBASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Gm23033-201ENSMUST00000157996 134 ntBASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Gm9892-201ENSMUST00000182415 992 ntBASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Gm28779-201ENSMUST00000189678 323 ntBASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Gm43402-201ENSMUST00000197159 159 ntBASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Gm42925-201ENSMUST00000197359 285 ntBASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Mir6925-201ENSMUST00000197857 70 ntBASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Gm44320-201ENSMUST00000199276 86 ntBASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Gm44477-201ENSMUST00000199661 110 ntBASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Gm45445-201ENSMUST00000209586 232 ntBASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Gm7495-201ENSMUST00000215099 426 ntBASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Gm22806-201ENSMUST00000082738 136 ntBASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Trafd1Q3UDK1 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
Trafd1Q3UDK1 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Gm23551-201ENSMUST00000116852 121 ntBASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Gm12721-201ENSMUST00000120621 268 ntBASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Gm26278-201ENSMUST00000157098 132 ntBASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Gm23588-201ENSMUST00000157659 99 ntBASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Gm24419-201ENSMUST00000157875 332 ntBASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Gm23476-201ENSMUST00000158881 274 ntBASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Gm29231-201ENSMUST00000179850 319 ntBASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trafd1Q3UDK1 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms