Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Mir7k-201ENSMUST00000184115 110 ntBASIC4.59□□□□□ -1.67
Col9a1Q05722 Gm27733-201ENSMUST00000184803 68 ntBASIC4.59□□□□□ -1.67
Col9a1Q05722 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.59□□□□□ -1.67
Col9a1Q05722 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Col9a1Q05722 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.59□□□□□ -1.67
Col9a1Q05722 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Col9a1Q05722 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col9a1Q05722 Gm23736-201ENSMUST00000082553 75 ntBASIC4.59□□□□□ -1.67
Col9a1Q05722 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.59□□□□□ -1.67
Col9a1Q05722 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.59□□□□□ -1.67
Col9a1Q05722 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Col9a1Q05722 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Col9a1Q05722 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Col9a1Q05722 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
Col9a1Q05722 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Col9a1Q05722 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
Col9a1Q05722 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.59□□□□□ -1.68
Col9a1Q05722 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
Col9a1Q05722 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col9a1Q05722 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col9a1Q05722 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col9a1Q05722 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Col9a1Q05722 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.58□□□□□ -1.68
Col9a1Q05722 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Col9a1Q05722 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Col9a1Q05722 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Col9a1Q05722 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col9a1Q05722 Gm23271-201ENSMUST00000104052 124 ntBASIC4.58□□□□□ -1.68
Col9a1Q05722 Gm13867-201ENSMUST00000120844 395 ntBASIC4.58□□□□□ -1.68
Col9a1Q05722 Gm8200-201ENSMUST00000122390 222 ntBASIC4.58□□□□□ -1.68
Col9a1Q05722 Gm24371-201ENSMUST00000122662 267 ntBASIC4.58□□□□□ -1.68
Col9a1Q05722 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col9a1Q05722 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.58□□□□□ -1.68
Col9a1Q05722 Gm22908-201ENSMUST00000177620 110 ntBASIC4.58□□□□□ -1.68
Col9a1Q05722 Mir6370-201ENSMUST00000183510 120 ntBASIC4.58□□□□□ -1.68
Col9a1Q05722 Mir208a-201ENSMUST00000083498 83 ntBASIC4.58□□□□□ -1.68
Col9a1Q05722 Gm25821-201ENSMUST00000093657 133 ntBASIC4.58□□□□□ -1.68
Col9a1Q05722 Gm26327-201ENSMUST00000093724 111 ntBASIC4.58□□□□□ -1.68
Col9a1Q05722 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Col9a1Q05722 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Col9a1Q05722 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Col9a1Q05722 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
Col9a1Q05722 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col9a1Q05722 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.58□□□□□ -1.68
Col9a1Q05722 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Col9a1Q05722 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.58□□□□□ -1.68
Col9a1Q05722 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
Col9a1Q05722 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.58□□□□□ -1.68
Col9a1Q05722 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.58□□□□□ -1.68
Col9a1Q05722 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.57□□□□□ -1.68
Col9a1Q05722 AC153967.1-201ENSMUST00000219333 3190 ntBASIC4.57□□□□□ -1.68
Col9a1Q05722 AC124562.2-201ENSMUST00000223888 2313 ntBASIC4.57□□□□□ -1.68
Col9a1Q05722 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
Col9a1Q05722 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col9a1Q05722 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.57□□□□□ -1.68
Col9a1Q05722 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col9a1Q05722 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col9a1Q05722 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col9a1Q05722 Gm37456-201ENSMUST00000193176 5837 ntBASIC4.57□□□□□ -1.68
Col9a1Q05722 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col9a1Q05722 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Col9a1Q05722 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col9a1Q05722 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col9a1Q05722 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col9a1Q05722 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col9a1Q05722 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col9a1Q05722 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Col9a1Q05722 Gm22498-201ENSMUST00000104497 86 ntBASIC4.57□□□□□ -1.68
Col9a1Q05722 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.57□□□□□ -1.68
Col9a1Q05722 Gm14916-201ENSMUST00000121904 204 ntBASIC4.57□□□□□ -1.68
Col9a1Q05722 Gm22957-201ENSMUST00000122511 123 ntBASIC4.57□□□□□ -1.68
Col9a1Q05722 Gm27396-201ENSMUST00000157708 58 ntBASIC4.57□□□□□ -1.68
Col9a1Q05722 Gm24601-201ENSMUST00000157970 143 ntBASIC4.57□□□□□ -1.68
Col9a1Q05722 Gm23194-201ENSMUST00000158813 105 ntBASIC4.57□□□□□ -1.68
Col9a1Q05722 Gm28650-201ENSMUST00000188413 411 ntBASIC4.57□□□□□ -1.68
Col9a1Q05722 Gm42719-201ENSMUST00000197393 355 ntBASIC4.57□□□□□ -1.68
Col9a1Q05722 CT025538.3-201ENSMUST00000225279 3848 ntBASIC4.57□□□□□ -1.68
Col9a1Q05722 Mir201-201ENSMUST00000083470 66 ntBASIC4.57□□□□□ -1.68
Col9a1Q05722 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col9a1Q05722 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col9a1Q05722 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC4.57□□□□□ -1.68
Col9a1Q05722 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC4.57□□□□□ -1.68
Col9a1Q05722 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC4.57□□□□□ -1.68
Col9a1Q05722 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col9a1Q05722 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
Col9a1Q05722 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col9a1Q05722 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Col9a1Q05722 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col9a1Q05722 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col9a1Q05722 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.56□□□□□ -1.68
Col9a1Q05722 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col9a1Q05722 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col9a1Q05722 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col9a1Q05722 Gm26418-201ENSMUST00000104275 137 ntBASIC4.56□□□□□ -1.68
Col9a1Q05722 Gm15268-201ENSMUST00000118845 352 ntBASIC4.56□□□□□ -1.68
Col9a1Q05722 Gm16265-201ENSMUST00000134558 108 ntBASIC4.56□□□□□ -1.68
Col9a1Q05722 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC4.56□□□□□ -1.68
Col9a1Q05722 Gm26466-201ENSMUST00000179615 79 ntBASIC4.56□□□□□ -1.68
Col9a1Q05722 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.56□□□□□ -1.68
Col9a1Q05722 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms