Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm24116-201ENSMUST00000103975 107 ntBASIC3.3□□□□□ -1.88
Col8a1Q00780 Gm23322-201ENSMUST00000104464 167 ntBASIC3.3□□□□□ -1.88
Col8a1Q00780 Gm23651-201ENSMUST00000116755 120 ntBASIC3.3□□□□□ -1.88
Col8a1Q00780 Gm15613-201ENSMUST00000118396 326 ntBASIC3.3□□□□□ -1.88
Col8a1Q00780 Gm23957-201ENSMUST00000157209 90 ntBASIC3.3□□□□□ -1.88
Col8a1Q00780 Gm23956-201ENSMUST00000157211 119 ntBASIC3.3□□□□□ -1.88
Col8a1Q00780 Gm24138-201ENSMUST00000157572 114 ntBASIC3.3□□□□□ -1.88
Col8a1Q00780 Gm22606-201ENSMUST00000158290 103 ntBASIC3.3□□□□□ -1.88
Col8a1Q00780 Gm2389-201ENSMUST00000160487 189 ntBASIC3.3□□□□□ -1.88
Col8a1Q00780 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Col8a1Q00780 Gm24799-201ENSMUST00000178431 79 ntBASIC3.3□□□□□ -1.88
Col8a1Q00780 Gm29104-201ENSMUST00000186304 222 ntBASIC3.3□□□□□ -1.88
Col8a1Q00780 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.3□□□□□ -1.88
Col8a1Q00780 Gm37693-201ENSMUST00000194562 234 ntBASIC3.3□□□□□ -1.88
Col8a1Q00780 Gm36259-201ENSMUST00000197340 392 ntBASIC3.3□□□□□ -1.88
Col8a1Q00780 Mir721-201ENSMUST00000200230 88 ntBASIC3.3□□□□□ -1.88
Col8a1Q00780 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.3□□□□□ -1.88
Col8a1Q00780 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col8a1Q00780 Gm25987-201ENSMUST00000083234 107 ntBASIC3.3□□□□□ -1.88
Col8a1Q00780 Gm26314-201ENSMUST00000083891 107 ntBASIC3.3□□□□□ -1.88
Col8a1Q00780 Gm10351-201ENSMUST00000087694 125 ntBASIC3.3□□□□□ -1.88
Col8a1Q00780 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.3□□□□□ -1.88
Col8a1Q00780 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col8a1Q00780 Gm42482-201ENSMUST00000198904 1947 ntBASIC3.3□□□□□ -1.88
Col8a1Q00780 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col8a1Q00780 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col8a1Q00780 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.29□□□□□ -1.88
Col8a1Q00780 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col8a1Q00780 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col8a1Q00780 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Col8a1Q00780 Gm22472-201ENSMUST00000104115 134 ntBASIC3.29□□□□□ -1.88
Col8a1Q00780 Gm23532-201ENSMUST00000104569 112 ntBASIC3.29□□□□□ -1.88
Col8a1Q00780 Gm13419-201ENSMUST00000121711 271 ntBASIC3.29□□□□□ -1.88
Col8a1Q00780 Gm26275-201ENSMUST00000157101 268 ntBASIC3.29□□□□□ -1.88
Col8a1Q00780 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC3.29□□□□□ -1.88
Col8a1Q00780 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.29□□□□□ -1.88
Col8a1Q00780 Gm37796-201ENSMUST00000195327 134 ntBASIC3.29□□□□□ -1.88
Col8a1Q00780 Gm42526-201ENSMUST00000198956 393 ntBASIC3.29□□□□□ -1.88
Col8a1Q00780 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Col8a1Q00780 Gm36776-201ENSMUST00000207006 203 ntBASIC3.29□□□□□ -1.88
Col8a1Q00780 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.29□□□□□ -1.88
Col8a1Q00780 Gm18991-201ENSMUST00000209225 746 ntBASIC3.29□□□□□ -1.88
Col8a1Q00780 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Col8a1Q00780 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.29□□□□□ -1.88
Col8a1Q00780 Gm25800-201ENSMUST00000082636 134 ntBASIC3.29□□□□□ -1.88
Col8a1Q00780 Gm24204-201ENSMUST00000082950 107 ntBASIC3.29□□□□□ -1.88
Col8a1Q00780 Mir101b-201ENSMUST00000083622 97 ntBASIC3.29□□□□□ -1.88
Col8a1Q00780 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col8a1Q00780 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Col8a1Q00780 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col8a1Q00780 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.28□□□□□ -1.88
Col8a1Q00780 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
Col8a1Q00780 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col8a1Q00780 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.28□□□□□ -1.88
Col8a1Q00780 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.28□□□□□ -1.88
Col8a1Q00780 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col8a1Q00780 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.28□□□□□ -1.88
Col8a1Q00780 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Col8a1Q00780 Gm26019-201ENSMUST00000104407 119 ntBASIC3.28□□□□□ -1.88
Col8a1Q00780 Gm12902-201ENSMUST00000118389 322 ntBASIC3.28□□□□□ -1.88
Col8a1Q00780 Gm12793-201ENSMUST00000119268 292 ntBASIC3.28□□□□□ -1.88
Col8a1Q00780 Gm14748-201ENSMUST00000119819 411 ntBASIC3.28□□□□□ -1.88
Col8a1Q00780 Gm14782-201ENSMUST00000120151 195 ntBASIC3.28□□□□□ -1.88
Col8a1Q00780 Gm11456-201ENSMUST00000121070 256 ntBASIC3.28□□□□□ -1.88
Col8a1Q00780 Gm23602-201ENSMUST00000157258 132 ntBASIC3.28□□□□□ -1.88
Col8a1Q00780 Gm22890-201ENSMUST00000158642 144 ntBASIC3.28□□□□□ -1.88
Col8a1Q00780 Gm24308-201ENSMUST00000177773 114 ntBASIC3.28□□□□□ -1.88
Col8a1Q00780 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC3.28□□□□□ -1.88
Col8a1Q00780 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.28□□□□□ -1.88
Col8a1Q00780 Gm45860-201ENSMUST00000212700 334 ntBASIC3.28□□□□□ -1.88
Col8a1Q00780 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.28□□□□□ -1.88
Col8a1Q00780 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.28□□□□□ -1.88
Col8a1Q00780 Gm9765-201ENSMUST00000043170 321 ntBASIC3.28□□□□□ -1.88
Col8a1Q00780 Gm23722-201ENSMUST00000083002 130 ntBASIC3.28□□□□□ -1.88
Col8a1Q00780 Gm24533-201ENSMUST00000083138 196 ntBASIC3.28□□□□□ -1.88
Col8a1Q00780 Gm24616-201ENSMUST00000083274 139 ntBASIC3.28□□□□□ -1.88
Col8a1Q00780 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.28□□□□□ -1.88
Col8a1Q00780 AC152162.1-201ENSMUST00000225910 2917 ntBASIC3.28□□□□□ -1.88
Col8a1Q00780 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col8a1Q00780 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
Col8a1Q00780 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.27□□□□□ -1.89
Col8a1Q00780 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Col8a1Q00780 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col8a1Q00780 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.27□□□□□ -1.89
Col8a1Q00780 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Col8a1Q00780 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Col8a1Q00780 Gm24068-201ENSMUST00000104513 132 ntBASIC3.27□□□□□ -1.89
Col8a1Q00780 Gm13992-201ENSMUST00000120558 156 ntBASIC3.27□□□□□ -1.89
Col8a1Q00780 Gm24015-201ENSMUST00000157725 232 ntBASIC3.27□□□□□ -1.89
Col8a1Q00780 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Col8a1Q00780 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Col8a1Q00780 Gm27761-201ENSMUST00000184091 131 ntBASIC3.27□□□□□ -1.89
Col8a1Q00780 Mir7050-201ENSMUST00000184636 60 ntBASIC3.27□□□□□ -1.89
Col8a1Q00780 Gm37300-201ENSMUST00000193327 280 ntBASIC3.27□□□□□ -1.89
Col8a1Q00780 AC173345.2-201ENSMUST00000222795 153 ntBASIC3.27□□□□□ -1.89
Col8a1Q00780 AC183092.1-201ENSMUST00000224301 153 ntBASIC3.27□□□□□ -1.89
Col8a1Q00780 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col8a1Q00780 Gm9174-201ENSMUST00000078149 255 ntBASIC3.27□□□□□ -1.89
Col8a1Q00780 Gm24152-201ENSMUST00000082764 163 ntBASIC3.27□□□□□ -1.89
Col8a1Q00780 Mir146-201ENSMUST00000083667 65 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 113.8 ms