Protein–RNA interactions for Protein: P59114

Pcif1, Phosphorylated CTD-interacting factor 1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1P59114 Snord42a-201ENSMUST00000082606 65 ntBASIC3.11□□□□□ -1.91
Pcif1P59114 Gm26164-201ENSMUST00000083793 104 ntBASIC3.11□□□□□ -1.91
Pcif1P59114 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.11□□□□□ -1.91
Pcif1P59114 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Pcif1P59114 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Pcif1P59114 Mir701-201ENSMUST00000102208 109 ntBASIC3.1□□□□□ -1.91
Pcif1P59114 Gm22658-201ENSMUST00000104196 155 ntBASIC3.1□□□□□ -1.91
Pcif1P59114 Gm15714-201ENSMUST00000117168 250 ntBASIC3.1□□□□□ -1.91
Pcif1P59114 Gm25781-201ENSMUST00000122527 84 ntBASIC3.1□□□□□ -1.91
Pcif1P59114 Gm24481-201ENSMUST00000157210 102 ntBASIC3.1□□□□□ -1.91
Pcif1P59114 Gm24958-201ENSMUST00000158009 97 ntBASIC3.1□□□□□ -1.91
Pcif1P59114 Gm22085-201ENSMUST00000158344 110 ntBASIC3.1□□□□□ -1.91
Pcif1P59114 Gm22435-201ENSMUST00000158552 128 ntBASIC3.1□□□□□ -1.91
Pcif1P59114 Gm24681-201ENSMUST00000158760 107 ntBASIC3.1□□□□□ -1.91
Pcif1P59114 Gm37313-201ENSMUST00000191673 290 ntBASIC3.1□□□□□ -1.91
Pcif1P59114 Gm19777-201ENSMUST00000191940 358 ntBASIC3.1□□□□□ -1.91
Pcif1P59114 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC3.1□□□□□ -1.91
Pcif1P59114 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.1□□□□□ -1.91
Pcif1P59114 Gm45315-201ENSMUST00000209283 333 ntBASIC3.1□□□□□ -1.91
Pcif1P59114 AC164297.3-201ENSMUST00000224238 94 ntBASIC3.1□□□□□ -1.91
Pcif1P59114 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Pcif1P59114 Gm25512-201ENSMUST00000083863 107 ntBASIC3.1□□□□□ -1.91
Pcif1P59114 Gm26111-201ENSMUST00000083969 106 ntBASIC3.1□□□□□ -1.91
Pcif1P59114 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Pcif1P59114 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC3.1□□□□□ -1.91
Pcif1P59114 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Pcif1P59114 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.1□□□□□ -1.91
Pcif1P59114 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.1□□□□□ -1.91
Pcif1P59114 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Pcif1P59114 Mir759-201ENSMUST00000103254 98 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Gm25376-201ENSMUST00000104340 133 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Gm26256-201ENSMUST00000122499 186 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Gm22073-201ENSMUST00000122668 189 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.09□□□□□ -1.91
Pcif1P59114 Gm23391-201ENSMUST00000157579 104 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Gm23641-201ENSMUST00000157857 101 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Gm26088-201ENSMUST00000157896 131 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Gm22839-201ENSMUST00000158436 304 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Gm16111-201ENSMUST00000162128 285 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Mir7242-201ENSMUST00000183710 79 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Gm27698-201ENSMUST00000184060 249 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Gm27582-201ENSMUST00000184084 126 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Gm27505-201ENSMUST00000185071 110 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Pcif1P59114 Gm34314-201ENSMUST00000203622 367 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Gm44844-201ENSMUST00000207242 336 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Gm45403-201ENSMUST00000209453 276 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Pcif1P59114 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.09□□□□□ -1.91
Pcif1P59114 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC3.09□□□□□ -1.91
Pcif1P59114 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Gm26066-201ENSMUST00000083385 109 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Gm24817-201ENSMUST00000093672 105 ntBASIC3.09□□□□□ -1.91
Pcif1P59114 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
Pcif1P59114 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.09□□□□□ -1.92
Pcif1P59114 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Pcif1P59114 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Pcif1P59114 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Pcif1P59114 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Pcif1P59114 Gm25407-201ENSMUST00000104102 134 ntBASIC3.08□□□□□ -1.92
Pcif1P59114 Gm23128-201ENSMUST00000104257 132 ntBASIC3.08□□□□□ -1.92
Pcif1P59114 Defa-ps13-201ENSMUST00000120695 204 ntBASIC3.08□□□□□ -1.92
Pcif1P59114 Gm14678-201ENSMUST00000121396 482 ntBASIC3.08□□□□□ -1.92
Pcif1P59114 Gm26255-201ENSMUST00000122492 103 ntBASIC3.08□□□□□ -1.92
Pcif1P59114 Gm22026-201ENSMUST00000122735 281 ntBASIC3.08□□□□□ -1.92
Pcif1P59114 Gm26277-201ENSMUST00000157097 152 ntBASIC3.08□□□□□ -1.92
Pcif1P59114 Gm24504-201ENSMUST00000157679 100 ntBASIC3.08□□□□□ -1.92
Pcif1P59114 Gm23895-201ENSMUST00000158108 160 ntBASIC3.08□□□□□ -1.92
Pcif1P59114 Gm22434-201ENSMUST00000158549 122 ntBASIC3.08□□□□□ -1.92
Pcif1P59114 Gm25671-201ENSMUST00000178612 105 ntBASIC3.08□□□□□ -1.92
Pcif1P59114 Gm23307-201ENSMUST00000179167 105 ntBASIC3.08□□□□□ -1.92
Pcif1P59114 Gm25286-201ENSMUST00000179790 105 ntBASIC3.08□□□□□ -1.92
Pcif1P59114 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Pcif1P59114 Gm5329-201ENSMUST00000186898 463 ntBASIC3.08□□□□□ -1.92
Pcif1P59114 Gm20058-201ENSMUST00000186939 284 ntBASIC3.08□□□□□ -1.92
Pcif1P59114 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC3.08□□□□□ -1.92
Pcif1P59114 Gm23128-202ENSMUST00000196578 133 ntBASIC3.08□□□□□ -1.92
Pcif1P59114 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.08□□□□□ -1.92
Pcif1P59114 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Pcif1P59114 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Pcif1P59114 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.08□□□□□ -1.92
Pcif1P59114 Gm22620-201ENSMUST00000082700 133 ntBASIC3.08□□□□□ -1.92
Pcif1P59114 Gm26327-201ENSMUST00000093724 111 ntBASIC3.08□□□□□ -1.92
Pcif1P59114 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Pcif1P59114 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Pcif1P59114 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Pcif1P59114 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.07□□□□□ -1.92
Pcif1P59114 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
Pcif1P59114 Snord14c-201ENSMUST00000101927 86 ntBASIC3.07□□□□□ -1.92
Pcif1P59114 Gm15844-201ENSMUST00000118016 576 ntBASIC3.07□□□□□ -1.92
Pcif1P59114 Gm15183-201ENSMUST00000118933 348 ntBASIC3.07□□□□□ -1.92
Pcif1P59114 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.07□□□□□ -1.92
Pcif1P59114 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
Pcif1P59114 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.07□□□□□ -1.92
Pcif1P59114 Gm27926-201ENSMUST00000157180 66 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 108.1 ms