Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm25283-201ENSMUST00000157272 77 ntBASIC1.2□□□□□ -2.22
Cux1P53564 Gm22431-201ENSMUST00000158545 107 ntBASIC1.2□□□□□ -2.22
Cux1P53564 Gm17038-201ENSMUST00000166586 494 ntBASIC1.2□□□□□ -2.22
Cux1P53564 Gm24417-201ENSMUST00000178123 79 ntBASIC1.2□□□□□ -2.22
Cux1P53564 Gm24653-201ENSMUST00000178541 79 ntBASIC1.2□□□□□ -2.22
Cux1P53564 Gm25934-201ENSMUST00000178642 79 ntBASIC1.2□□□□□ -2.22
Cux1P53564 Gm27607-201ENSMUST00000185162 122 ntBASIC1.2□□□□□ -2.22
Cux1P53564 Gm34701-202ENSMUST00000204685 360 ntBASIC1.2□□□□□ -2.22
Cux1P53564 Gm45247-201ENSMUST00000210757 309 ntBASIC1.2□□□□□ -2.22
Cux1P53564 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC1.2□□□□□ -2.22
Cux1P53564 AL929285.1-201ENSMUST00000215522 229 ntBASIC1.2□□□□□ -2.22
Cux1P53564 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Cux1P53564 Gm26128-201ENSMUST00000083170 110 ntBASIC1.2□□□□□ -2.22
Cux1P53564 Gm44286-201ENSMUST00000204098 1487 ntBASIC1.19□□□□□ -2.22
Cux1P53564 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.19□□□□□ -2.22
Cux1P53564 Gm14932-201ENSMUST00000117112 453 ntBASIC1.19□□□□□ -2.22
Cux1P53564 Mir1949-201ENSMUST00000157434 141 ntBASIC1.19□□□□□ -2.22
Cux1P53564 Gm24854-201ENSMUST00000158025 98 ntBASIC1.19□□□□□ -2.22
Cux1P53564 Gm24002-201ENSMUST00000158456 104 ntBASIC1.19□□□□□ -2.22
Cux1P53564 Gm21737-201ENSMUST00000178112 664 ntBASIC1.19□□□□□ -2.22
Cux1P53564 Gm21729-201ENSMUST00000180058 664 ntBASIC1.19□□□□□ -2.22
Cux1P53564 Gm21853-201ENSMUST00000180071 664 ntBASIC1.19□□□□□ -2.22
Cux1P53564 Gm20901-201ENSMUST00000180177 664 ntBASIC1.19□□□□□ -2.22
Cux1P53564 Gm29073-201ENSMUST00000185563 664 ntBASIC1.19□□□□□ -2.22
Cux1P53564 Gm29495-201ENSMUST00000189319 664 ntBASIC1.19□□□□□ -2.22
Cux1P53564 Gm28090-201ENSMUST00000189458 664 ntBASIC1.19□□□□□ -2.22
Cux1P53564 Gm21647-201ENSMUST00000189755 664 ntBASIC1.19□□□□□ -2.22
Cux1P53564 Gm29165-201ENSMUST00000190655 664 ntBASIC1.19□□□□□ -2.22
Cux1P53564 Gm29211-201ENSMUST00000191470 664 ntBASIC1.19□□□□□ -2.22
Cux1P53564 Gm36891-201ENSMUST00000191995 655 ntBASIC1.19□□□□□ -2.22
Cux1P53564 Gm44182-201ENSMUST00000204052 115 ntBASIC1.19□□□□□ -2.22
Cux1P53564 Gm19140-201ENSMUST00000209790 421 ntBASIC1.19□□□□□ -2.22
Cux1P53564 AC157017.2-201ENSMUST00000218354 777 ntBASIC1.19□□□□□ -2.22
Cux1P53564 Gm2446-201ENSMUST00000220144 772 ntBASIC1.19□□□□□ -2.22
Cux1P53564 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Cux1P53564 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Cux1P53564 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Cux1P53564 Gm23321-201ENSMUST00000104465 126 ntBASIC1.18□□□□□ -2.22
Cux1P53564 Gm15312-201ENSMUST00000118827 271 ntBASIC1.18□□□□□ -2.22
Cux1P53564 Gm23605-201ENSMUST00000157255 127 ntBASIC1.18□□□□□ -2.22
Cux1P53564 Gm22082-201ENSMUST00000157587 161 ntBASIC1.18□□□□□ -2.22
Cux1P53564 Gm17119-201ENSMUST00000163943 280 ntBASIC1.18□□□□□ -2.22
Cux1P53564 Atp2b4-208ENSMUST00000167348 243 ntBASIC1.18□□□□□ -2.22
Cux1P53564 Gm28453-203ENSMUST00000187041 189 ntBASIC1.18□□□□□ -2.22
Cux1P53564 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.18□□□□□ -2.22
Cux1P53564 Gm44384-201ENSMUST00000200208 114 ntBASIC1.18□□□□□ -2.22
Cux1P53564 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC1.18□□□□□ -2.22
Cux1P53564 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC1.18□□□□□ -2.22
Cux1P53564 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.18□□□□□ -2.22
Cux1P53564 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.18□□□□□ -2.22
Cux1P53564 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.18□□□□□ -2.22
Cux1P53564 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.18□□□□□ -2.22
Cux1P53564 Gm10038-201ENSMUST00000077233 441 ntBASIC1.18□□□□□ -2.22
Cux1P53564 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.18□□□□□ -2.22
Cux1P53564 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.18□□□□□ -2.22
Cux1P53564 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
Cux1P53564 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.18□□□□□ -2.22
Cux1P53564 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.17□□□□□ -2.22
Cux1P53564 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.17□□□□□ -2.22
Cux1P53564 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.17□□□□□ -2.22
Cux1P53564 Gm15176-201ENSMUST00000117734 135 ntBASIC1.17□□□□□ -2.22
Cux1P53564 Gm11862-201ENSMUST00000119678 659 ntBASIC1.17□□□□□ -2.22
Cux1P53564 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.17□□□□□ -2.22
Cux1P53564 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
Cux1P53564 Gm23172-201ENSMUST00000157160 124 ntBASIC1.17□□□□□ -2.22
Cux1P53564 Gm24716-201ENSMUST00000157524 104 ntBASIC1.17□□□□□ -2.22
Cux1P53564 Gm26195-201ENSMUST00000175035 101 ntBASIC1.17□□□□□ -2.22
Cux1P53564 Mir6399-201ENSMUST00000184050 84 ntBASIC1.17□□□□□ -2.22
Cux1P53564 Gm28862-201ENSMUST00000188246 163 ntBASIC1.17□□□□□ -2.22
Cux1P53564 Gm44656-201ENSMUST00000208428 490 ntBASIC1.17□□□□□ -2.22
Cux1P53564 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.17□□□□□ -2.22
Cux1P53564 AC158803.1-201ENSMUST00000219495 316 ntBASIC1.17□□□□□ -2.22
Cux1P53564 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.17□□□□□ -2.22
Cux1P53564 Defa-ps6-201ENSMUST00000122172 282 ntBASIC1.16□□□□□ -2.22
Cux1P53564 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC1.16□□□□□ -2.22
Cux1P53564 Gm25666-201ENSMUST00000157702 107 ntBASIC1.16□□□□□ -2.22
Cux1P53564 Gm16162-201ENSMUST00000162296 297 ntBASIC1.16□□□□□ -2.22
Cux1P53564 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
Cux1P53564 Gm44524-201ENSMUST00000203899 271 ntBASIC1.16□□□□□ -2.22
Cux1P53564 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC1.16□□□□□ -2.22
Cux1P53564 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC1.16□□□□□ -2.22
Cux1P53564 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC1.16□□□□□ -2.22
Cux1P53564 AC133076.1-201ENSMUST00000228074 484 ntBASIC1.16□□□□□ -2.22
Cux1P53564 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Cux1P53564 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.16□□□□□ -2.22
Cux1P53564 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.15□□□□□ -2.22
Cux1P53564 Gm12393-201ENSMUST00000117084 848 ntBASIC1.15□□□□□ -2.22
Cux1P53564 Gm16431-201ENSMUST00000117454 431 ntBASIC1.15□□□□□ -2.22
Cux1P53564 Gm24056-201ENSMUST00000158617 146 ntBASIC1.15□□□□□ -2.22
Cux1P53564 Gm23181-201ENSMUST00000158685 110 ntBASIC1.15□□□□□ -2.22
Cux1P53564 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.15□□□□□ -2.22
Cux1P53564 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC1.15□□□□□ -2.22
Cux1P53564 Gm23151-201ENSMUST00000178061 107 ntBASIC1.15□□□□□ -2.22
Cux1P53564 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
Cux1P53564 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
Cux1P53564 Gm43228-201ENSMUST00000200735 264 ntBASIC1.15□□□□□ -2.22
Cux1P53564 Gm23040-201ENSMUST00000083869 163 ntBASIC1.15□□□□□ -2.22
Cux1P53564 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Cux1P53564 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Cux1P53564 Gm22163-201ENSMUST00000158408 135 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms