Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm35857-201ENSMUST00000212739 178 ntBASIC4.36□□□□□ -1.71
Rfx1P48377 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Rfx1P48377 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Rfx1P48377 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.36□□□□□ -1.71
Rfx1P48377 AC135292.1-201ENSMUST00000227665 204 ntBASIC4.36□□□□□ -1.71
Rfx1P48377 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Rfx1P48377 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Rfx1P48377 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.35□□□□□ -1.71
Rfx1P48377 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Rfx1P48377 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Rfx1P48377 Gm23273-201ENSMUST00000104058 135 ntBASIC4.35□□□□□ -1.71
Rfx1P48377 Gm23178-201ENSMUST00000116782 95 ntBASIC4.35□□□□□ -1.71
Rfx1P48377 Gm14838-201ENSMUST00000118913 248 ntBASIC4.35□□□□□ -1.71
Rfx1P48377 Gm14845-201ENSMUST00000121259 306 ntBASIC4.35□□□□□ -1.71
Rfx1P48377 Gm23219-201ENSMUST00000158123 87 ntBASIC4.35□□□□□ -1.71
Rfx1P48377 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC4.35□□□□□ -1.71
Rfx1P48377 Gm22450-201ENSMUST00000179641 107 ntBASIC4.35□□□□□ -1.71
Rfx1P48377 Gm25024-201ENSMUST00000179667 104 ntBASIC4.35□□□□□ -1.71
Rfx1P48377 Gm25473-201ENSMUST00000180191 107 ntBASIC4.35□□□□□ -1.71
Rfx1P48377 Gm6947-201ENSMUST00000186254 78 ntBASIC4.35□□□□□ -1.71
Rfx1P48377 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.35□□□□□ -1.71
Rfx1P48377 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.35□□□□□ -1.71
Rfx1P48377 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.35□□□□□ -1.71
Rfx1P48377 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Rfx1P48377 Gm24856-201ENSMUST00000082809 107 ntBASIC4.35□□□□□ -1.71
Rfx1P48377 Gm22443-201ENSMUST00000082890 107 ntBASIC4.35□□□□□ -1.71
Rfx1P48377 Gm26071-201ENSMUST00000083261 107 ntBASIC4.35□□□□□ -1.71
Rfx1P48377 Gm24521-201ENSMUST00000083958 107 ntBASIC4.35□□□□□ -1.71
Rfx1P48377 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Rfx1P48377 Gm43881-201ENSMUST00000203051 2530 ntBASIC4.35□□□□□ -1.71
Rfx1P48377 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
Rfx1P48377 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.34□□□□□ -1.71
Rfx1P48377 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
Rfx1P48377 Gm45039-201ENSMUST00000209181 3477 ntBASIC4.34□□□□□ -1.71
Rfx1P48377 Gm25765-201ENSMUST00000104100 132 ntBASIC4.34□□□□□ -1.71
Rfx1P48377 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.34□□□□□ -1.71
Rfx1P48377 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC4.34□□□□□ -1.71
Rfx1P48377 Mir103-2-201ENSMUST00000083629 86 ntBASIC4.34□□□□□ -1.71
Rfx1P48377 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Rfx1P48377 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Rfx1P48377 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Rfx1P48377 Gm8473-201ENSMUST00000176697 1885 ntBASIC4.34□□□□□ -1.71
Rfx1P48377 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Rfx1P48377 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Rfx1P48377 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Rfx1P48377 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Rfx1P48377 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Rfx1P48377 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Rfx1P48377 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Rfx1P48377 Gm11460-201ENSMUST00000118200 361 ntBASIC4.33□□□□□ -1.72
Rfx1P48377 Gm26148-201ENSMUST00000157430 68 ntBASIC4.33□□□□□ -1.72
Rfx1P48377 Gm24745-201ENSMUST00000157840 85 ntBASIC4.33□□□□□ -1.72
Rfx1P48377 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4.33□□□□□ -1.72
Rfx1P48377 Gm10075-201ENSMUST00000162030 545 ntBASIC4.33□□□□□ -1.72
Rfx1P48377 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC4.33□□□□□ -1.72
Rfx1P48377 Mir1251-201ENSMUST00000175486 84 ntBASIC4.33□□□□□ -1.72
Rfx1P48377 Ang-ps3-201ENSMUST00000177964 433 ntBASIC4.33□□□□□ -1.72
Rfx1P48377 Gm23002-201ENSMUST00000179221 107 ntBASIC4.33□□□□□ -1.72
Rfx1P48377 Gm5329-201ENSMUST00000186898 463 ntBASIC4.33□□□□□ -1.72
Rfx1P48377 Trbv6-201ENSMUST00000193743 276 ntBASIC4.33□□□□□ -1.72
Rfx1P48377 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC4.33□□□□□ -1.72
Rfx1P48377 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.33□□□□□ -1.72
Rfx1P48377 Gm7065-201ENSMUST00000222150 474 ntBASIC4.33□□□□□ -1.72
Rfx1P48377 Gm37061-201ENSMUST00000195066 3243 ntBASIC4.33□□□□□ -1.72
Rfx1P48377 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Rfx1P48377 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Rfx1P48377 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC4.33□□□□□ -1.72
Rfx1P48377 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Rfx1P48377 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Rfx1P48377 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Rfx1P48377 Gm22758-201ENSMUST00000102275 96 ntBASIC4.32□□□□□ -1.72
Rfx1P48377 Gm14803-201ENSMUST00000117163 361 ntBASIC4.32□□□□□ -1.72
Rfx1P48377 Gm11982-201ENSMUST00000121480 314 ntBASIC4.32□□□□□ -1.72
Rfx1P48377 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Rfx1P48377 Gm24244-201ENSMUST00000157317 130 ntBASIC4.32□□□□□ -1.72
Rfx1P48377 Gm24716-201ENSMUST00000157524 104 ntBASIC4.32□□□□□ -1.72
Rfx1P48377 Gm23559-201ENSMUST00000157824 103 ntBASIC4.32□□□□□ -1.72
Rfx1P48377 Gm43704-201ENSMUST00000196164 496 ntBASIC4.32□□□□□ -1.72
Rfx1P48377 Gm44429-201ENSMUST00000203542 186 ntBASIC4.32□□□□□ -1.72
Rfx1P48377 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.32□□□□□ -1.72
Rfx1P48377 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Rfx1P48377 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Rfx1P48377 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
Rfx1P48377 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Rfx1P48377 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Rfx1P48377 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Rfx1P48377 Gm14282-201ENSMUST00000119484 240 ntBASIC4.31□□□□□ -1.72
Rfx1P48377 Gm6574-201ENSMUST00000120037 362 ntBASIC4.31□□□□□ -1.72
Rfx1P48377 Gm22204-201ENSMUST00000122654 327 ntBASIC4.31□□□□□ -1.72
Rfx1P48377 Gm24850-201ENSMUST00000158029 119 ntBASIC4.31□□□□□ -1.72
Rfx1P48377 Gm24006-201ENSMUST00000158462 132 ntBASIC4.31□□□□□ -1.72
Rfx1P48377 Gm28304-201ENSMUST00000185977 312 ntBASIC4.31□□□□□ -1.72
Rfx1P48377 Gm29256-201ENSMUST00000189094 312 ntBASIC4.31□□□□□ -1.72
Rfx1P48377 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Rfx1P48377 Gm28484-201ENSMUST00000190606 312 ntBASIC4.31□□□□□ -1.72
Rfx1P48377 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC4.31□□□□□ -1.72
Rfx1P48377 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.31□□□□□ -1.72
Rfx1P48377 Gm23723-201ENSMUST00000082996 132 ntBASIC4.31□□□□□ -1.72
Rfx1P48377 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Rfx1P48377 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 147.9 ms