Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Mir93-201ENSMUST00000083593 88 ntBASIC1.88□□□□□ -2.11
P20040 Snord38a-201ENSMUST00000083746 71 ntBASIC1.88□□□□□ -2.11
P20040 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
P20040 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.88□□□□□ -2.11
P20040 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
P20040 Gm23202-201ENSMUST00000104376 129 ntBASIC1.87□□□□□ -2.11
P20040 Mdga2-203ENSMUST00000113942 423 ntBASIC1.87□□□□□ -2.11
P20040 Mir1192-201ENSMUST00000116976 121 ntBASIC1.87□□□□□ -2.11
P20040 Gm13341-201ENSMUST00000120780 672 ntBASIC1.87□□□□□ -2.11
P20040 Gm25642-201ENSMUST00000175137 66 ntBASIC1.87□□□□□ -2.11
P20040 Gm23813-201ENSMUST00000175153 77 ntBASIC1.87□□□□□ -2.11
P20040 Gm27490-201ENSMUST00000184754 128 ntBASIC1.87□□□□□ -2.11
P20040 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC1.87□□□□□ -2.11
P20040 Gm29950-201ENSMUST00000195273 237 ntBASIC1.87□□□□□ -2.11
P20040 Gm45558-201ENSMUST00000209384 1895 ntBASIC1.87□□□□□ -2.11
P20040 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.87□□□□□ -2.11
P20040 Gm25130-201ENSMUST00000082650 156 ntBASIC1.87□□□□□ -2.11
P20040 Gm25698-201ENSMUST00000082897 107 ntBASIC1.87□□□□□ -2.11
P20040 AC125374.3-201ENSMUST00000214983 2810 ntBASIC1.87□□□□□ -2.11
P20040 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
P20040 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
P20040 Gm25094-201ENSMUST00000103992 131 ntBASIC1.86□□□□□ -2.11
P20040 Mir344e-201ENSMUST00000104677 66 ntBASIC1.86□□□□□ -2.11
P20040 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
P20040 Gm12871-201ENSMUST00000118758 438 ntBASIC1.86□□□□□ -2.11
P20040 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.86□□□□□ -2.11
P20040 Gm15536-201ENSMUST00000121411 114 ntBASIC1.86□□□□□ -2.11
P20040 Gm22093-201ENSMUST00000158980 111 ntBASIC1.86□□□□□ -2.11
P20040 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
P20040 Gm24315-201ENSMUST00000177835 127 ntBASIC1.86□□□□□ -2.11
P20040 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
P20040 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
P20040 Gm28745-201ENSMUST00000190069 305 ntBASIC1.86□□□□□ -2.11
P20040 Gm37869-201ENSMUST00000193385 595 ntBASIC1.86□□□□□ -2.11
P20040 Gm37641-201ENSMUST00000193837 239 ntBASIC1.86□□□□□ -2.11
P20040 Trbv18-201ENSMUST00000194256 294 ntBASIC1.86□□□□□ -2.11
P20040 Gm37361-201ENSMUST00000194345 132 ntBASIC1.86□□□□□ -2.11
P20040 Gm37119-201ENSMUST00000195691 389 ntBASIC1.86□□□□□ -2.11
P20040 Gm42509-201ENSMUST00000197390 781 ntBASIC1.86□□□□□ -2.11
P20040 Gm43510-201ENSMUST00000197922 353 ntBASIC1.86□□□□□ -2.11
P20040 Mir497-201ENSMUST00000200557 84 ntBASIC1.86□□□□□ -2.11
P20040 Gm44794-201ENSMUST00000206550 411 ntBASIC1.86□□□□□ -2.11
P20040 Gm45252-201ENSMUST00000211579 397 ntBASIC1.86□□□□□ -2.11
P20040 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.86□□□□□ -2.11
P20040 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
P20040 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
P20040 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
P20040 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.86□□□□□ -2.11
P20040 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.86□□□□□ -2.11
P20040 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
P20040 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.85□□□□□ -2.11
P20040 Gm25460-201ENSMUST00000157954 127 ntBASIC1.85□□□□□ -2.11
P20040 Gm24857-201ENSMUST00000158061 310 ntBASIC1.85□□□□□ -2.11
P20040 Gm24885-201ENSMUST00000158783 270 ntBASIC1.85□□□□□ -2.11
P20040 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC1.85□□□□□ -2.11
P20040 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC1.85□□□□□ -2.11
P20040 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC1.85□□□□□ -2.11
P20040 Igkv12-49-201ENSMUST00000197714 278 ntBASIC1.85□□□□□ -2.11
P20040 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
P20040 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.85□□□□□ -2.11
P20040 AC153541.1-201ENSMUST00000213786 294 ntBASIC1.85□□□□□ -2.11
P20040 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
P20040 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.85□□□□□ -2.11
P20040 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC1.85□□□□□ -2.11
P20040 AC129017.1-201ENSMUST00000228363 270 ntBASIC1.85□□□□□ -2.11
P20040 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
P20040 Gm24044-201ENSMUST00000083107 156 ntBASIC1.85□□□□□ -2.11
P20040 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.85□□□□□ -2.11
P20040 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
P20040 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.85□□□□□ -2.11
P20040 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
P20040 Gm12779-201ENSMUST00000121496 143 ntBASIC1.84□□□□□ -2.11
P20040 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.84□□□□□ -2.11
P20040 Gm26102-201ENSMUST00000157251 284 ntBASIC1.84□□□□□ -2.11
P20040 Gm25454-201ENSMUST00000157947 315 ntBASIC1.84□□□□□ -2.11
P20040 Gm22159-201ENSMUST00000158412 130 ntBASIC1.84□□□□□ -2.11
P20040 Snord11-201ENSMUST00000158468 84 ntBASIC1.84□□□□□ -2.11
P20040 Gm5277-201ENSMUST00000164923 556 ntBASIC1.84□□□□□ -2.11
P20040 Gm20689-201ENSMUST00000176033 279 ntBASIC1.84□□□□□ -2.11
P20040 Gm22631-201ENSMUST00000179656 94 ntBASIC1.84□□□□□ -2.11
P20040 Gm27660-201ENSMUST00000184028 208 ntBASIC1.84□□□□□ -2.11
P20040 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.84□□□□□ -2.11
P20040 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC1.84□□□□□ -2.11
P20040 Gm44844-201ENSMUST00000207242 336 ntBASIC1.84□□□□□ -2.11
P20040 AC134334.1-201ENSMUST00000214277 255 ntBASIC1.84□□□□□ -2.11
P20040 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.84□□□□□ -2.11
P20040 AC153529.1-201ENSMUST00000217818 370 ntBASIC1.84□□□□□ -2.11
P20040 CT025606.1-201ENSMUST00000218273 324 ntBASIC1.84□□□□□ -2.11
P20040 Gm7214-201ENSMUST00000222428 272 ntBASIC1.84□□□□□ -2.11
P20040 Gm25586-201ENSMUST00000082499 112 ntBASIC1.84□□□□□ -2.11
P20040 Gm23246-201ENSMUST00000083371 67 ntBASIC1.84□□□□□ -2.11
P20040 Mir30d-201ENSMUST00000083503 82 ntBASIC1.84□□□□□ -2.11
P20040 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
P20040 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
P20040 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
P20040 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
P20040 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
P20040 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.83□□□□□ -2.12
P20040 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
P20040 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms