Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm43898-201ENSMUST00000204456 424 ntBASIC4.25□□□□□ -1.73
Msx1P13297 AC135292.1-201ENSMUST00000227665 204 ntBASIC4.25□□□□□ -1.73
Msx1P13297 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Msx1P13297 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Msx1P13297 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Msx1P13297 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Msx1P13297 AC159625.1-201ENSMUST00000220994 2625 ntBASIC4.25□□□□□ -1.73
Msx1P13297 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.24□□□□□ -1.73
Msx1P13297 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Msx1P13297 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.24□□□□□ -1.73
Msx1P13297 Gm42547-201ENSMUST00000201159 3798 ntBASIC4.24□□□□□ -1.73
Msx1P13297 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Msx1P13297 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Msx1P13297 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Msx1P13297 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Msx1P13297 Gm26249-201ENSMUST00000116708 118 ntBASIC4.24□□□□□ -1.73
Msx1P13297 Gm23655-201ENSMUST00000122627 105 ntBASIC4.24□□□□□ -1.73
Msx1P13297 Gm23230-201ENSMUST00000157298 133 ntBASIC4.24□□□□□ -1.73
Msx1P13297 Gm22586-201ENSMUST00000157507 122 ntBASIC4.24□□□□□ -1.73
Msx1P13297 Gm23101-201ENSMUST00000157550 137 ntBASIC4.24□□□□□ -1.73
Msx1P13297 Gm24877-201ENSMUST00000158779 116 ntBASIC4.24□□□□□ -1.73
Msx1P13297 Gm22069-201ENSMUST00000179911 107 ntBASIC4.24□□□□□ -1.73
Msx1P13297 Gm27733-201ENSMUST00000184803 68 ntBASIC4.24□□□□□ -1.73
Msx1P13297 Gm26265-202ENSMUST00000196326 133 ntBASIC4.24□□□□□ -1.73
Msx1P13297 Gm18000-201ENSMUST00000212153 800 ntBASIC4.24□□□□□ -1.73
Msx1P13297 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.24□□□□□ -1.73
Msx1P13297 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.24□□□□□ -1.73
Msx1P13297 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Msx1P13297 Gm10042-201ENSMUST00000079884 78 ntBASIC4.24□□□□□ -1.73
Msx1P13297 Gm25006-201ENSMUST00000083813 107 ntBASIC4.24□□□□□ -1.73
Msx1P13297 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Msx1P13297 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.24□□□□□ -1.73
Msx1P13297 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Msx1P13297 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.24□□□□□ -1.73
Msx1P13297 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.23□□□□□ -1.73
Msx1P13297 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Msx1P13297 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Msx1P13297 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Msx1P13297 Gm44114-201ENSMUST00000203270 2727 ntBASIC4.23□□□□□ -1.73
Msx1P13297 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Msx1P13297 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Msx1P13297 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Msx1P13297 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Msx1P13297 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Msx1P13297 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Msx1P13297 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.23□□□□□ -1.73
Msx1P13297 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Msx1P13297 Gm25420-201ENSMUST00000104216 127 ntBASIC4.23□□□□□ -1.73
Msx1P13297 Gm24232-201ENSMUST00000104314 132 ntBASIC4.23□□□□□ -1.73
Msx1P13297 Gm22498-201ENSMUST00000104497 86 ntBASIC4.23□□□□□ -1.73
Msx1P13297 Gm11460-201ENSMUST00000118200 361 ntBASIC4.23□□□□□ -1.73
Msx1P13297 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.23□□□□□ -1.73
Msx1P13297 Gm24894-201ENSMUST00000122744 118 ntBASIC4.23□□□□□ -1.73
Msx1P13297 Gm2182-201ENSMUST00000145243 663 ntBASIC4.23□□□□□ -1.73
Msx1P13297 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.23□□□□□ -1.73
Msx1P13297 Gm22850-201ENSMUST00000157714 82 ntBASIC4.23□□□□□ -1.73
Msx1P13297 Gm26219-201ENSMUST00000175216 71 ntBASIC4.23□□□□□ -1.73
Msx1P13297 Gm28830-201ENSMUST00000188192 213 ntBASIC4.23□□□□□ -1.73
Msx1P13297 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.23□□□□□ -1.73
Msx1P13297 Gm42834-201ENSMUST00000196845 256 ntBASIC4.23□□□□□ -1.73
Msx1P13297 Gm43676-201ENSMUST00000197532 540 ntBASIC4.23□□□□□ -1.73
Msx1P13297 Gm18429-201ENSMUST00000198707 421 ntBASIC4.23□□□□□ -1.73
Msx1P13297 Gm15235-201ENSMUST00000200572 194 ntBASIC4.23□□□□□ -1.73
Msx1P13297 Gm39147-201ENSMUST00000211376 465 ntBASIC4.23□□□□□ -1.73
Msx1P13297 Gm25797-201ENSMUST00000082640 107 ntBASIC4.23□□□□□ -1.73
Msx1P13297 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Msx1P13297 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Msx1P13297 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Msx1P13297 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.23□□□□□ -1.73
Msx1P13297 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Msx1P13297 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Msx1P13297 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Msx1P13297 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.22□□□□□ -1.73
Msx1P13297 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Msx1P13297 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Msx1P13297 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.22□□□□□ -1.73
Msx1P13297 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Msx1P13297 Gm26135-201ENSMUST00000101993 72 ntBASIC4.22□□□□□ -1.73
Msx1P13297 Gm23772-201ENSMUST00000104433 102 ntBASIC4.22□□□□□ -1.73
Msx1P13297 Gm11874-201ENSMUST00000117437 130 ntBASIC4.22□□□□□ -1.73
Msx1P13297 Gm13167-201ENSMUST00000118554 578 ntBASIC4.22□□□□□ -1.73
Msx1P13297 Gm14516-201ENSMUST00000120012 252 ntBASIC4.22□□□□□ -1.73
Msx1P13297 Gm22986-201ENSMUST00000122753 130 ntBASIC4.22□□□□□ -1.73
Msx1P13297 Gm25386-201ENSMUST00000157814 288 ntBASIC4.22□□□□□ -1.73
Msx1P13297 Gm24634-201ENSMUST00000158672 107 ntBASIC4.22□□□□□ -1.73
Msx1P13297 Gm26160-201ENSMUST00000158965 63 ntBASIC4.22□□□□□ -1.73
Msx1P13297 Snord50b-201ENSMUST00000178497 72 ntBASIC4.22□□□□□ -1.73
Msx1P13297 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC4.22□□□□□ -1.73
Msx1P13297 Gm45499-201ENSMUST00000211656 280 ntBASIC4.22□□□□□ -1.73
Msx1P13297 AC141895.1-201ENSMUST00000218141 273 ntBASIC4.22□□□□□ -1.73
Msx1P13297 Gm22950-201ENSMUST00000082776 107 ntBASIC4.22□□□□□ -1.73
Msx1P13297 Gm26327-201ENSMUST00000093724 111 ntBASIC4.22□□□□□ -1.73
Msx1P13297 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Msx1P13297 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.22□□□□□ -1.73
Msx1P13297 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Msx1P13297 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Msx1P13297 Neat1-201ENSMUST00000173672 20771 ntBASIC4.22□□□□□ -1.73
Msx1P13297 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.73
Msx1P13297 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.21□□□□□ -1.73
Msx1P13297 Gm38255-201ENSMUST00000194910 2996 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms