Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm17072-201ENSMUST00000166673 658 ntBASIC2.26□□□□□ -2.05
Lire1P11260 Gm18417-201ENSMUST00000176564 648 ntBASIC2.26□□□□□ -2.05
Lire1P11260 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Lire1P11260 Gm25457-201ENSMUST00000179509 107 ntBASIC2.26□□□□□ -2.05
Lire1P11260 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.26□□□□□ -2.05
Lire1P11260 Gm28474-201ENSMUST00000188501 315 ntBASIC2.26□□□□□ -2.05
Lire1P11260 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.26□□□□□ -2.05
Lire1P11260 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Lire1P11260 Gm44990-201ENSMUST00000203922 217 ntBASIC2.26□□□□□ -2.05
Lire1P11260 Gm45879-201ENSMUST00000212521 392 ntBASIC2.26□□□□□ -2.05
Lire1P11260 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Lire1P11260 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.26□□□□□ -2.05
Lire1P11260 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.26□□□□□ -2.05
Lire1P11260 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.26□□□□□ -2.05
Lire1P11260 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Lire1P11260 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.25□□□□□ -2.05
Lire1P11260 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Lire1P11260 Gm14013-201ENSMUST00000119006 270 ntBASIC2.25□□□□□ -2.05
Lire1P11260 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.25□□□□□ -2.05
Lire1P11260 Gm25020-201ENSMUST00000178071 107 ntBASIC2.25□□□□□ -2.05
Lire1P11260 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Lire1P11260 Gm37119-201ENSMUST00000195691 389 ntBASIC2.25□□□□□ -2.05
Lire1P11260 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.25□□□□□ -2.05
Lire1P11260 Gm9377-201ENSMUST00000207227 623 ntBASIC2.25□□□□□ -2.05
Lire1P11260 Gm44666-201ENSMUST00000208544 391 ntBASIC2.25□□□□□ -2.05
Lire1P11260 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.25□□□□□ -2.05
Lire1P11260 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Lire1P11260 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Lire1P11260 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Lire1P11260 Gm12443-201ENSMUST00000122308 323 ntBASIC2.24□□□□□ -2.05
Lire1P11260 Gm14530-201ENSMUST00000122391 333 ntBASIC2.24□□□□□ -2.05
Lire1P11260 Gm25625-201ENSMUST00000157221 96 ntBASIC2.24□□□□□ -2.05
Lire1P11260 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Lire1P11260 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
Lire1P11260 Gm23813-201ENSMUST00000175153 77 ntBASIC2.24□□□□□ -2.05
Lire1P11260 Gm25933-201ENSMUST00000178943 108 ntBASIC2.24□□□□□ -2.05
Lire1P11260 Mir6925-201ENSMUST00000197857 70 ntBASIC2.24□□□□□ -2.05
Lire1P11260 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Lire1P11260 Gm45658-201ENSMUST00000209197 580 ntBASIC2.24□□□□□ -2.05
Lire1P11260 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.24□□□□□ -2.05
Lire1P11260 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.24□□□□□ -2.05
Lire1P11260 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Lire1P11260 Gm24670-201ENSMUST00000104154 132 ntBASIC2.23□□□□□ -2.05
Lire1P11260 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.23□□□□□ -2.05
Lire1P11260 Gm22099-201ENSMUST00000157925 123 ntBASIC2.23□□□□□ -2.05
Lire1P11260 Gm16584-201ENSMUST00000159267 189 ntBASIC2.23□□□□□ -2.05
Lire1P11260 Gm16232-201ENSMUST00000162856 167 ntBASIC2.23□□□□□ -2.05
Lire1P11260 Gm26864-201ENSMUST00000181346 156 ntBASIC2.23□□□□□ -2.05
Lire1P11260 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC2.23□□□□□ -2.05
Lire1P11260 Gm2719-201ENSMUST00000191929 444 ntBASIC2.23□□□□□ -2.05
Lire1P11260 Gm44923-201ENSMUST00000206673 85 ntBASIC2.23□□□□□ -2.05
Lire1P11260 Gm2676-201ENSMUST00000207279 606 ntBASIC2.23□□□□□ -2.05
Lire1P11260 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.23□□□□□ -2.05
Lire1P11260 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Lire1P11260 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Lire1P11260 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.22□□□□□ -2.05
Lire1P11260 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
Lire1P11260 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Lire1P11260 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Lire1P11260 Gm8858-201ENSMUST00000118259 342 ntBASIC2.22□□□□□ -2.05
Lire1P11260 Gm11363-201ENSMUST00000121672 548 ntBASIC2.22□□□□□ -2.05
Lire1P11260 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Lire1P11260 Gm24210-201ENSMUST00000158263 133 ntBASIC2.22□□□□□ -2.05
Lire1P11260 Gm22192-201ENSMUST00000175128 85 ntBASIC2.22□□□□□ -2.05
Lire1P11260 Gm24388-201ENSMUST00000177872 107 ntBASIC2.22□□□□□ -2.05
Lire1P11260 Gm32175-201ENSMUST00000193641 346 ntBASIC2.22□□□□□ -2.05
Lire1P11260 Gm29950-201ENSMUST00000195273 237 ntBASIC2.22□□□□□ -2.05
Lire1P11260 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.22□□□□□ -2.05
Lire1P11260 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.22□□□□□ -2.05
Lire1P11260 AC116589.7-201ENSMUST00000221061 239 ntBASIC2.22□□□□□ -2.05
Lire1P11260 AC164117.1-201ENSMUST00000221726 239 ntBASIC2.22□□□□□ -2.05
Lire1P11260 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.22□□□□□ -2.05
Lire1P11260 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC2.22□□□□□ -2.05
Lire1P11260 Gm25632-201ENSMUST00000083112 85 ntBASIC2.22□□□□□ -2.05
Lire1P11260 Gm26175-201ENSMUST00000083794 131 ntBASIC2.22□□□□□ -2.05
Lire1P11260 Mir463-201ENSMUST00000093570 75 ntBASIC2.22□□□□□ -2.05
Lire1P11260 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.22□□□□□ -2.05
Lire1P11260 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.22□□□□□ -2.05
Lire1P11260 Mir582-201ENSMUST00000103758 81 ntBASIC2.21□□□□□ -2.06
Lire1P11260 Gm12370-201ENSMUST00000117809 604 ntBASIC2.21□□□□□ -2.06
Lire1P11260 Gm13804-201ENSMUST00000119552 172 ntBASIC2.21□□□□□ -2.06
Lire1P11260 Gm23184-201ENSMUST00000122594 131 ntBASIC2.21□□□□□ -2.06
Lire1P11260 Gm22733-201ENSMUST00000158094 91 ntBASIC2.21□□□□□ -2.06
Lire1P11260 Gm25642-201ENSMUST00000175137 66 ntBASIC2.21□□□□□ -2.06
Lire1P11260 Gm9022-202ENSMUST00000183285 483 ntBASIC2.21□□□□□ -2.06
Lire1P11260 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC2.21□□□□□ -2.06
Lire1P11260 Gm28404-201ENSMUST00000190242 453 ntBASIC2.21□□□□□ -2.06
Lire1P11260 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Lire1P11260 Gm43583-201ENSMUST00000199235 303 ntBASIC2.21□□□□□ -2.06
Lire1P11260 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.21□□□□□ -2.06
Lire1P11260 Gm45678-201ENSMUST00000210509 295 ntBASIC2.21□□□□□ -2.06
Lire1P11260 Gm32300-201ENSMUST00000221735 515 ntBASIC2.21□□□□□ -2.06
Lire1P11260 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Lire1P11260 Gm18617-201ENSMUST00000222311 259 ntBASIC2.21□□□□□ -2.06
Lire1P11260 AC174797.4-201ENSMUST00000225510 347 ntBASIC2.21□□□□□ -2.06
Lire1P11260 n-R5s37-201ENSMUST00000082533 118 ntBASIC2.21□□□□□ -2.06
Lire1P11260 Gm26126-201ENSMUST00000083188 164 ntBASIC2.21□□□□□ -2.06
Lire1P11260 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
Lire1P11260 Mir669d-201ENSMUST00000104644 121 ntBASIC2.2□□□□□ -2.06
Lire1P11260 Gm13756-201ENSMUST00000117618 222 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms