Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm18854-201ENSMUST00000211196 329 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Gm19326-201ENSMUST00000219818 326 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Gm5955-201ENSMUST00000222712 219 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 AC151833.1-201ENSMUST00000227752 574 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Gm23377-201ENSMUST00000082943 126 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Gm24316-201ENSMUST00000083041 107 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Gm22829-201ENSMUST00000083771 106 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Col3a1P08121 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col3a1P08121 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col3a1P08121 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col3a1P08121 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Col3a1P08121 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 Gm24640-201ENSMUST00000116949 126 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 Gm22626-201ENSMUST00000116990 126 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.92□□□□□ -1.94
Col3a1P08121 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.92□□□□□ -1.94
Col3a1P08121 Gm23600-201ENSMUST00000157260 71 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 Gm25341-201ENSMUST00000157461 268 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 Gm20698-201ENSMUST00000175657 233 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 Gm22264-201ENSMUST00000178200 107 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 Gm24761-201ENSMUST00000179589 127 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 Gm24488-201ENSMUST00000179934 127 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 Gm25701-201ENSMUST00000179988 127 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 Gm26431-201ENSMUST00000180199 127 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 Gm9696-202ENSMUST00000191541 830 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 Gm44322-201ENSMUST00000196830 115 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 Gm19418-201ENSMUST00000197436 580 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 Gm44477-201ENSMUST00000199661 110 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.92□□□□□ -1.94
Col3a1P08121 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.92□□□□□ -1.94
Col3a1P08121 Gm45616-201ENSMUST00000211711 319 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 Gm8031-201ENSMUST00000213430 626 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Col3a1P08121 Snord21-201ENSMUST00000082519 94 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 Gm25628-201ENSMUST00000084002 105 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
Col3a1P08121 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.92□□□□□ -1.94
Col3a1P08121 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col3a1P08121 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
Col3a1P08121 Gm23941-201ENSMUST00000101953 107 ntBASIC2.91□□□□□ -1.94
Col3a1P08121 Mir466h-201ENSMUST00000104748 81 ntBASIC2.91□□□□□ -1.94
Col3a1P08121 Gm12137-201ENSMUST00000119565 346 ntBASIC2.91□□□□□ -1.94
Col3a1P08121 Gm13433-201ENSMUST00000121701 240 ntBASIC2.91□□□□□ -1.94
Col3a1P08121 Gm15147-201ENSMUST00000122263 483 ntBASIC2.91□□□□□ -1.94
Col3a1P08121 Gm22843-201ENSMUST00000157710 134 ntBASIC2.91□□□□□ -1.94
Col3a1P08121 Gm24439-201ENSMUST00000157894 117 ntBASIC2.91□□□□□ -1.94
Col3a1P08121 Gm23411-201ENSMUST00000157988 62 ntBASIC2.91□□□□□ -1.94
Col3a1P08121 Snora15-201ENSMUST00000177461 131 ntBASIC2.91□□□□□ -1.94
Col3a1P08121 Gm24518-201ENSMUST00000180275 94 ntBASIC2.91□□□□□ -1.94
Col3a1P08121 Gm27490-201ENSMUST00000184754 128 ntBASIC2.91□□□□□ -1.94
Col3a1P08121 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.91□□□□□ -1.94
Col3a1P08121 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.91□□□□□ -1.94
Col3a1P08121 AC135019.1-201ENSMUST00000219949 307 ntBASIC2.91□□□□□ -1.94
Col3a1P08121 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.91□□□□□ -1.94
Col3a1P08121 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.91□□□□□ -1.94
Col3a1P08121 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.91□□□□□ -1.94
Col3a1P08121 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Col3a1P08121 Gm22293-201ENSMUST00000083314 109 ntBASIC2.91□□□□□ -1.94
Col3a1P08121 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Col3a1P08121 Gm43320-201ENSMUST00000196047 2916 ntBASIC2.91□□□□□ -1.94
Col3a1P08121 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.91□□□□□ -1.94
Col3a1P08121 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
Col3a1P08121 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
Col3a1P08121 Gm15936-201ENSMUST00000118706 460 ntBASIC2.9□□□□□ -1.94
Col3a1P08121 Gm22257-201ENSMUST00000158687 301 ntBASIC2.9□□□□□ -1.94
Col3a1P08121 Mir3964-201ENSMUST00000174898 74 ntBASIC2.9□□□□□ -1.94
Col3a1P08121 Gm22348-201ENSMUST00000178674 79 ntBASIC2.9□□□□□ -1.94
Col3a1P08121 Gm8807-201ENSMUST00000179328 492 ntBASIC2.9□□□□□ -1.94
Col3a1P08121 Gm22263-201ENSMUST00000180060 104 ntBASIC2.9□□□□□ -1.94
Col3a1P08121 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
Col3a1P08121 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.9□□□□□ -1.94
Col3a1P08121 Gm43286-201ENSMUST00000197420 424 ntBASIC2.9□□□□□ -1.94
Col3a1P08121 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.9□□□□□ -1.94
Col3a1P08121 Gm44419-201ENSMUST00000203338 229 ntBASIC2.9□□□□□ -1.94
Col3a1P08121 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.9□□□□□ -1.94
Col3a1P08121 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC2.9□□□□□ -1.94
Col3a1P08121 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.9□□□□□ -1.94
Col3a1P08121 Gm46997-201ENSMUST00000222108 217 ntBASIC2.9□□□□□ -1.94
Col3a1P08121 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Col3a1P08121 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
Col3a1P08121 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.9□□□□□ -1.94
Col3a1P08121 AC126673.3-201ENSMUST00000223414 3829 ntBASIC2.9□□□□□ -1.94
Col3a1P08121 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
Col3a1P08121 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Col3a1P08121 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Col3a1P08121 Mir344e-201ENSMUST00000104677 66 ntBASIC2.9□□□□□ -1.95
Col3a1P08121 Gm15215-201ENSMUST00000117773 489 ntBASIC2.9□□□□□ -1.95
Col3a1P08121 Gm13518-201ENSMUST00000120018 233 ntBASIC2.9□□□□□ -1.95
Col3a1P08121 Gm22482-201ENSMUST00000122563 359 ntBASIC2.9□□□□□ -1.95
Col3a1P08121 Gm24965-201ENSMUST00000157922 106 ntBASIC2.9□□□□□ -1.95
Col3a1P08121 Gm20542-201ENSMUST00000174582 372 ntBASIC2.9□□□□□ -1.95
Col3a1P08121 Gm27608-201ENSMUST00000184822 162 ntBASIC2.9□□□□□ -1.95
Col3a1P08121 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC2.9□□□□□ -1.95
Col3a1P08121 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.9□□□□□ -1.95
Col3a1P08121 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.9□□□□□ -1.95
Col3a1P08121 Gm45313-201ENSMUST00000210584 178 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms