Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm22192-201ENSMUST00000175128 85 ntBASIC2.36□□□□□ -2.03
P04224 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC2.36□□□□□ -2.03
P04224 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC2.36□□□□□ -2.03
P04224 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.36□□□□□ -2.03
P04224 Gm28740-201ENSMUST00000186142 215 ntBASIC2.36□□□□□ -2.03
P04224 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
P04224 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.36□□□□□ -2.03
P04224 Gm37845-201ENSMUST00000194977 355 ntBASIC2.36□□□□□ -2.03
P04224 Mir7215-201ENSMUST00000200383 51 ntBASIC2.36□□□□□ -2.03
P04224 Gm43978-201ENSMUST00000203491 451 ntBASIC2.36□□□□□ -2.03
P04224 Gm44128-201ENSMUST00000204909 219 ntBASIC2.36□□□□□ -2.03
P04224 Gm36776-201ENSMUST00000207006 203 ntBASIC2.36□□□□□ -2.03
P04224 Gm44824-201ENSMUST00000207021 229 ntBASIC2.36□□□□□ -2.03
P04224 Gm44594-201ENSMUST00000208982 407 ntBASIC2.36□□□□□ -2.03
P04224 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.36□□□□□ -2.03
P04224 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.36□□□□□ -2.03
P04224 Gm25632-201ENSMUST00000083112 85 ntBASIC2.36□□□□□ -2.03
P04224 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.36□□□□□ -2.03
P04224 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.35□□□□□ -2.03
P04224 Gm26696-201ENSMUST00000181941 2848 ntBASIC2.35□□□□□ -2.03
P04224 Gm24049-201ENSMUST00000102409 100 ntBASIC2.35□□□□□ -2.03
P04224 Gm22656-201ENSMUST00000104199 171 ntBASIC2.35□□□□□ -2.03
P04224 Gm14774-201ENSMUST00000117857 536 ntBASIC2.35□□□□□ -2.03
P04224 Gm14215-201ENSMUST00000120578 221 ntBASIC2.35□□□□□ -2.03
P04224 Gm15120-201ENSMUST00000120602 301 ntBASIC2.35□□□□□ -2.03
P04224 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC2.35□□□□□ -2.03
P04224 Gm14530-201ENSMUST00000122391 333 ntBASIC2.35□□□□□ -2.03
P04224 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC2.35□□□□□ -2.03
P04224 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC2.35□□□□□ -2.03
P04224 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.35□□□□□ -2.03
P04224 Gm24436-201ENSMUST00000157889 302 ntBASIC2.35□□□□□ -2.03
P04224 Gm22535-201ENSMUST00000158174 119 ntBASIC2.35□□□□□ -2.03
P04224 Snord93-201ENSMUST00000175580 71 ntBASIC2.35□□□□□ -2.03
P04224 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.35□□□□□ -2.03
P04224 Gm26430-201ENSMUST00000178054 107 ntBASIC2.35□□□□□ -2.03
P04224 Gm25020-201ENSMUST00000178071 107 ntBASIC2.35□□□□□ -2.03
P04224 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
P04224 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC2.35□□□□□ -2.03
P04224 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
P04224 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.35□□□□□ -2.03
P04224 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.35□□□□□ -2.03
P04224 Gm43669-201ENSMUST00000198229 436 ntBASIC2.35□□□□□ -2.03
P04224 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.35□□□□□ -2.03
P04224 Gm45445-201ENSMUST00000209586 232 ntBASIC2.35□□□□□ -2.03
P04224 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.35□□□□□ -2.03
P04224 Gm24037-201ENSMUST00000082871 180 ntBASIC2.35□□□□□ -2.03
P04224 Gm26265-201ENSMUST00000083277 135 ntBASIC2.35□□□□□ -2.03
P04224 Gm26066-201ENSMUST00000083385 109 ntBASIC2.35□□□□□ -2.03
P04224 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.35□□□□□ -2.03
P04224 Mir423-201ENSMUST00000083584 109 ntBASIC2.35□□□□□ -2.03
P04224 Gm3867-201ENSMUST00000086108 279 ntBASIC2.35□□□□□ -2.03
P04224 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
P04224 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
P04224 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
P04224 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
P04224 Mir701-201ENSMUST00000102208 109 ntBASIC2.34□□□□□ -2.03
P04224 Gm25466-201ENSMUST00000103995 132 ntBASIC2.34□□□□□ -2.03
P04224 Gm22590-201ENSMUST00000104247 128 ntBASIC2.34□□□□□ -2.03
P04224 Gm13457-201ENSMUST00000117885 267 ntBASIC2.34□□□□□ -2.03
P04224 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.34□□□□□ -2.03
P04224 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.34□□□□□ -2.03
P04224 Gm22654-201ENSMUST00000157874 105 ntBASIC2.34□□□□□ -2.03
P04224 Gm24419-201ENSMUST00000157875 332 ntBASIC2.34□□□□□ -2.03
P04224 Gm25488-201ENSMUST00000158728 118 ntBASIC2.34□□□□□ -2.03
P04224 Igkv17-134-201ENSMUST00000168310 348 ntBASIC2.34□□□□□ -2.03
P04224 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
P04224 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
P04224 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC2.34□□□□□ -2.03
P04224 Gm18356-201ENSMUST00000185677 623 ntBASIC2.34□□□□□ -2.03
P04224 Gm34073-201ENSMUST00000195736 212 ntBASIC2.34□□□□□ -2.03
P04224 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.34□□□□□ -2.03
P04224 Gm43367-201ENSMUST00000199986 625 ntBASIC2.34□□□□□ -2.03
P04224 Gm44182-201ENSMUST00000204052 115 ntBASIC2.34□□□□□ -2.03
P04224 Gm43932-201ENSMUST00000204499 52 ntBASIC2.34□□□□□ -2.03
P04224 Gm44964-201ENSMUST00000207011 273 ntBASIC2.34□□□□□ -2.03
P04224 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.34□□□□□ -2.03
P04224 Gm44754-201ENSMUST00000208155 400 ntBASIC2.34□□□□□ -2.03
P04224 Gm45315-201ENSMUST00000209283 333 ntBASIC2.34□□□□□ -2.03
P04224 Gm45791-201ENSMUST00000212908 352 ntBASIC2.34□□□□□ -2.03
P04224 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.34□□□□□ -2.03
P04224 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.34□□□□□ -2.03
P04224 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.34□□□□□ -2.03
P04224 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
P04224 Snord104-201ENSMUST00000083192 70 ntBASIC2.34□□□□□ -2.03
P04224 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.34□□□□□ -2.04
P04224 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
P04224 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
P04224 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.33□□□□□ -2.04
P04224 Gm24338-201ENSMUST00000104205 127 ntBASIC2.33□□□□□ -2.04
P04224 Gm15010-201ENSMUST00000117153 407 ntBASIC2.33□□□□□ -2.04
P04224 Gm11512-201ENSMUST00000119669 663 ntBASIC2.33□□□□□ -2.04
P04224 Gm23169-201ENSMUST00000157157 112 ntBASIC2.33□□□□□ -2.04
P04224 Gm8292-201ENSMUST00000162574 396 ntBASIC2.33□□□□□ -2.04
P04224 Trbv18-201ENSMUST00000194256 294 ntBASIC2.33□□□□□ -2.04
P04224 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
P04224 Gm18453-201ENSMUST00000208000 626 ntBASIC2.33□□□□□ -2.04
P04224 AC166358.10-201ENSMUST00000220556 144 ntBASIC2.33□□□□□ -2.04
P04224 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.33□□□□□ -2.04
P04224 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.33□□□□□ -2.04
P04224 Gm23264-201ENSMUST00000083372 107 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms