| Hoxa3 | P02831 | Mir32-201 | ENSMUST00000083610 | 70 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Mir137-201 | ENSMUST00000083635 | 73 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm10242-201 | ENSMUST00000090064 | 330 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Olfr679-202 | ENSMUST00000214328 | 5184 nt | APPRIS P1 TSL 5 BASIC | 2.93 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Olfr116-202 | ENSMUST00000216128 | 4477 nt | APPRIS P1 TSL 5 BASIC | 2.93 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Olfr1309-202 | ENSMUST00000214537 | 4274 nt | APPRIS P1 TSL 5 BASIC | 2.93 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm43881-201 | ENSMUST00000203051 | 2530 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Olfr1446-203 | ENSMUST00000216805 | 2417 nt | APPRIS P1 TSL 3 BASIC | 2.93 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm32014-201 | ENSMUST00000214779 | 5145 nt | TSL 1 (best) BASIC | 2.93 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Olfr796-202 | ENSMUST00000214584 | 3554 nt | APPRIS P1 TSL 2 BASIC | 2.93 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Dst-211 | ENSMUST00000183034 | 23201 nt | APPRIS ALT2 TSL 5 BASIC | 2.93 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | AC154481.2-201 | ENSMUST00000222526 | 3175 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Prlr-202 | ENSMUST00000124470 | 9900 nt | APPRIS P3 TSL 1 (best) BASIC | 2.93 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Lyst-201 | ENSMUST00000110559 | 13181 nt | APPRIS P1 TSL 1 (best) BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Olfr1326-ps1-201 | ENSMUST00000059880 | 3637 nt | APPRIS P1 TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm6176-202 | ENSMUST00000207633 | 1581 nt | APPRIS P1 TSL 1 (best) BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Olfr68-202 | ENSMUST00000216811 | 4093 nt | APPRIS P1 TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Igkv7-33-201 | ENSMUST00000103376 | 362 nt | APPRIS ALT2 BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm24127-201 | ENSMUST00000104110 | 130 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm15002-201 | ENSMUST00000118406 | 452 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm11572-201 | ENSMUST00000119164 | 120 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm13541-201 | ENSMUST00000119519 | 283 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Defa-ps8-201 | ENSMUST00000120972 | 279 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm11240-201 | ENSMUST00000142047 | 751 nt | TSL 1 (best) BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm22034-201 | ENSMUST00000157283 | 134 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm23232-201 | ENSMUST00000157300 | 105 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm23234-201 | ENSMUST00000157304 | 134 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm23755-201 | ENSMUST00000157578 | 343 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm5168-202 | ENSMUST00000168002 | 636 nt | APPRIS P1 TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm24811-201 | ENSMUST00000175313 | 100 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm20692-201 | ENSMUST00000177251 | 681 nt | TSL 3 BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm27694-201 | ENSMUST00000184740 | 86 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Ska2l-ps-201 | ENSMUST00000186208 | 360 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm6947-201 | ENSMUST00000186254 | 78 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm28710-201 | ENSMUST00000186866 | 489 nt | TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm37587-202 | ENSMUST00000194935 | 475 nt | TSL 3 BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm2189-201 | ENSMUST00000201419 | 429 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm45420-201 | ENSMUST00000211243 | 425 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | AC114575.1-201 | ENSMUST00000218634 | 353 nt | TSL 3 BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Olfr6-204 | ENSMUST00000219365 | 951 nt | APPRIS P1 BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm22970-201 | ENSMUST00000083304 | 186 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Olfr152-201 | ENSMUST00000090709 | 951 nt | APPRIS P2 BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Olfr136-202 | ENSMUST00000208525 | 2534 nt | APPRIS P1 TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Olfr105-ps-202 | ENSMUST00000215518 | 3778 nt | APPRIS P1 TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Vmn2r67-201 | ENSMUST00000168730 | 2556 nt | APPRIS P1 TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Vmn2r-ps46-201 | ENSMUST00000172969 | 2556 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Mrgprx2-201 | ENSMUST00000098433 | 4610 nt | APPRIS P1 TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Olfr857-202 | ENSMUST00000212013 | 2306 nt | APPRIS P1 TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm37296-201 | ENSMUST00000192728 | 2922 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Trav14d-2-201 | ENSMUST00000103597 | 276 nt | APPRIS P1 BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Trav14n-2-201 | ENSMUST00000103623 | 276 nt | APPRIS P1 BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm25565-201 | ENSMUST00000104605 | 105 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm14894-201 | ENSMUST00000117170 | 270 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm15211-201 | ENSMUST00000118932 | 528 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm13210-201 | ENSMUST00000121483 | 273 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm15065-201 | ENSMUST00000121699 | 273 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm23355-201 | ENSMUST00000177614 | 107 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm23148-201 | ENSMUST00000180367 | 107 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm27535-201 | ENSMUST00000183814 | 157 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm28591-201 | ENSMUST00000185259 | 183 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm37449-201 | ENSMUST00000193016 | 270 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm37104-201 | ENSMUST00000193278 | 196 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm18658-201 | ENSMUST00000195558 | 270 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm42570-201 | ENSMUST00000195937 | 292 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm39380-201 | ENSMUST00000214710 | 192 nt | TSL 5 BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | AC145736.2-201 | ENSMUST00000216305 | 365 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | AC107864.1-201 | ENSMUST00000217937 | 496 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | AC129017.1-201 | ENSMUST00000228363 | 270 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm25258-201 | ENSMUST00000083049 | 107 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm22739-201 | ENSMUST00000083437 | 160 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Mir103-2-201 | ENSMUST00000083629 | 86 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm26314-201 | ENSMUST00000083891 | 107 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Olfr1226-202 | ENSMUST00000214709 | 5270 nt | APPRIS P1 TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | AI504432-201 | ENSMUST00000070085 | 5569 nt | TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Olfr364-ps1-203 | ENSMUST00000217298 | 2894 nt | APPRIS P1 TSL 5 BASIC | 2.9 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Gm8011-201 | ENSMUST00000172163 | 1751 nt | APPRIS P1 TSL 5 BASIC | 2.9 | □□□□□ -1.94 | | |
| Hoxa3 | P02831 | Cylc1-201 | ENSMUST00000101282 | 1923 nt | APPRIS P2 TSL 1 (best) BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Gm19541-201 | ENSMUST00000184488 | 2868 nt | TSL 1 (best) BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Gm12722-201 | ENSMUST00000118507 | 493 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Gm12276-201 | ENSMUST00000121709 | 301 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Gm12815-201 | ENSMUST00000121737 | 135 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Gm3848-202 | ENSMUST00000151564 | 301 nt | TSL 3 BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Crem-231 | ENSMUST00000152108 | 654 nt | TSL 5 BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Gm13853-201 | ENSMUST00000155496 | 557 nt | TSL 3 BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Gm23326-201 | ENSMUST00000157419 | 105 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Gm25519-201 | ENSMUST00000158392 | 127 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Gm29452-201 | ENSMUST00000187996 | 313 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Gm29140-201 | ENSMUST00000190187 | 476 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Gm28314-201 | ENSMUST00000191276 | 345 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Gm2077-201 | ENSMUST00000195017 | 319 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | AC124549.2-201 | ENSMUST00000224243 | 222 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Cfh-202 | ENSMUST00000111976 | 4365 nt | APPRIS P2 TSL 1 (best) BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Cfh-201 | ENSMUST00000066859 | 4361 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.9 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Gm10033-201 | ENSMUST00000072427 | 1813 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Gm38031-201 | ENSMUST00000191819 | 3015 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Gm42547-201 | ENSMUST00000201159 | 3798 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Olfr1211-204 | ENSMUST00000215205 | 4220 nt | APPRIS P1 TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Mir465b-1-201 | ENSMUST00000103940 | 79 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Mir465b-2-201 | ENSMUST00000104662 | 79 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| Hoxa3 | P02831 | Gm5762-201 | ENSMUST00000119204 | 258 nt | BASIC | 2.89 | □□□□□ -1.95 | | |