Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.42□□□□□ -2.18
CopeO89079 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.42□□□□□ -2.18
CopeO89079 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.42□□□□□ -2.18
CopeO89079 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.41□□□□□ -2.18
CopeO89079 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
CopeO89079 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
CopeO89079 Gm14678-201ENSMUST00000121396 482 ntBASIC1.41□□□□□ -2.18
CopeO89079 Gm22186-201ENSMUST00000157822 122 ntBASIC1.41□□□□□ -2.18
CopeO89079 Gm25454-201ENSMUST00000157947 315 ntBASIC1.41□□□□□ -2.18
CopeO89079 Mir6341-201ENSMUST00000183490 121 ntBASIC1.41□□□□□ -2.18
CopeO89079 Gm28283-201ENSMUST00000185509 178 ntBASIC1.41□□□□□ -2.18
CopeO89079 Gm28453-203ENSMUST00000187041 189 ntBASIC1.41□□□□□ -2.18
CopeO89079 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.41□□□□□ -2.18
CopeO89079 Gm28151-201ENSMUST00000189404 951 ntBASIC1.41□□□□□ -2.18
CopeO89079 Gm29657-201ENSMUST00000189807 342 ntBASIC1.41□□□□□ -2.18
CopeO89079 Gm8747-201ENSMUST00000195392 751 ntBASIC1.41□□□□□ -2.18
CopeO89079 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.41□□□□□ -2.18
CopeO89079 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.41□□□□□ -2.18
CopeO89079 Gm18691-201ENSMUST00000203593 872 ntBASIC1.41□□□□□ -2.18
CopeO89079 AC112274.2-201ENSMUST00000218436 170 ntBASIC1.41□□□□□ -2.18
CopeO89079 AC192334.2-201ENSMUST00000223087 1091 ntBASIC1.41□□□□□ -2.18
CopeO89079 Gm16976-205ENSMUST00000227324 226 ntBASIC1.41□□□□□ -2.18
CopeO89079 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
CopeO89079 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CopeO89079 Mir669d-201ENSMUST00000104644 121 ntBASIC1.4□□□□□ -2.19
CopeO89079 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC1.4□□□□□ -2.19
CopeO89079 Gm22082-201ENSMUST00000157587 161 ntBASIC1.4□□□□□ -2.19
CopeO89079 Gm24784-201ENSMUST00000157640 62 ntBASIC1.4□□□□□ -2.19
CopeO89079 Gm25012-201ENSMUST00000158396 164 ntBASIC1.4□□□□□ -2.19
CopeO89079 Gm25707-201ENSMUST00000175120 96 ntBASIC1.4□□□□□ -2.19
CopeO89079 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CopeO89079 Gm21978-201ENSMUST00000179696 377 ntBASIC1.4□□□□□ -2.19
CopeO89079 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CopeO89079 Gm29216-201ENSMUST00000187117 492 ntBASIC1.4□□□□□ -2.19
CopeO89079 Gm45150-201ENSMUST00000206051 467 ntBASIC1.4□□□□□ -2.19
CopeO89079 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC1.4□□□□□ -2.19
CopeO89079 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.4□□□□□ -2.19
CopeO89079 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.19
CopeO89079 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC1.4□□□□□ -2.19
CopeO89079 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.4□□□□□ -2.19
CopeO89079 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.4□□□□□ -2.19
CopeO89079 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.4□□□□□ -2.19
CopeO89079 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.4□□□□□ -2.19
CopeO89079 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CopeO89079 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CopeO89079 Gm26203-201ENSMUST00000082911 114 ntBASIC1.4□□□□□ -2.19
CopeO89079 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
CopeO89079 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.4□□□□□ -2.19
CopeO89079 Gm44821-201ENSMUST00000208212 2002 ntBASIC1.39□□□□□ -2.19
CopeO89079 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CopeO89079 Gm25088-201ENSMUST00000101803 79 ntBASIC1.39□□□□□ -2.19
CopeO89079 Mir706-201ENSMUST00000102262 84 ntBASIC1.39□□□□□ -2.19
CopeO89079 Gm22678-201ENSMUST00000116974 101 ntBASIC1.39□□□□□ -2.19
CopeO89079 Gm23078-201ENSMUST00000157848 148 ntBASIC1.39□□□□□ -2.19
CopeO89079 Gm25333-201ENSMUST00000158035 246 ntBASIC1.39□□□□□ -2.19
CopeO89079 Gm23196-201ENSMUST00000158806 107 ntBASIC1.39□□□□□ -2.19
CopeO89079 Gm25836-201ENSMUST00000158918 123 ntBASIC1.39□□□□□ -2.19
CopeO89079 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC1.39□□□□□ -2.19
CopeO89079 Gm25035-201ENSMUST00000175414 77 ntBASIC1.39□□□□□ -2.19
CopeO89079 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.39□□□□□ -2.19
CopeO89079 Gm29550-201ENSMUST00000185543 285 ntBASIC1.39□□□□□ -2.19
CopeO89079 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.39□□□□□ -2.19
CopeO89079 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.39□□□□□ -2.19
CopeO89079 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.39□□□□□ -2.19
CopeO89079 Gm44564-201ENSMUST00000207985 180 ntBASIC1.39□□□□□ -2.19
CopeO89079 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CopeO89079 Mir466n-201ENSMUST00000104798 94 ntBASIC1.38□□□□□ -2.19
CopeO89079 Gm14417-201ENSMUST00000120036 1074 ntBASIC1.38□□□□□ -2.19
CopeO89079 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC1.38□□□□□ -2.19
CopeO89079 Gm14989-201ENSMUST00000120497 207 ntBASIC1.38□□□□□ -2.19
CopeO89079 Gm15309-201ENSMUST00000121644 240 ntBASIC1.38□□□□□ -2.19
CopeO89079 Gm22338-201ENSMUST00000157715 129 ntBASIC1.38□□□□□ -2.19
CopeO89079 Gm22803-201ENSMUST00000158049 283 ntBASIC1.38□□□□□ -2.19
CopeO89079 Gm25361-201ENSMUST00000179358 76 ntBASIC1.38□□□□□ -2.19
CopeO89079 Gm25457-201ENSMUST00000179509 107 ntBASIC1.38□□□□□ -2.19
CopeO89079 Gm25936-201ENSMUST00000179952 114 ntBASIC1.38□□□□□ -2.19
CopeO89079 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.38□□□□□ -2.19
CopeO89079 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.38□□□□□ -2.19
CopeO89079 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CopeO89079 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.38□□□□□ -2.19
CopeO89079 Gm42960-201ENSMUST00000202160 241 ntBASIC1.38□□□□□ -2.19
CopeO89079 Gm18774-201ENSMUST00000218269 601 ntBASIC1.38□□□□□ -2.19
CopeO89079 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.38□□□□□ -2.19
CopeO89079 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.38□□□□□ -2.19
CopeO89079 Gm22723-201ENSMUST00000083820 129 ntBASIC1.38□□□□□ -2.19
CopeO89079 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CopeO89079 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.37□□□□□ -2.19
CopeO89079 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.37□□□□□ -2.19
CopeO89079 Gm23950-201ENSMUST00000104026 129 ntBASIC1.37□□□□□ -2.19
CopeO89079 Gm23744-201ENSMUST00000104231 149 ntBASIC1.37□□□□□ -2.19
CopeO89079 Gm14785-201ENSMUST00000120185 539 ntBASIC1.37□□□□□ -2.19
CopeO89079 Gm25325-201ENSMUST00000122559 86 ntBASIC1.37□□□□□ -2.19
CopeO89079 Gm17164-201ENSMUST00000169013 506 ntBASIC1.37□□□□□ -2.19
CopeO89079 Gm25958-201ENSMUST00000175114 71 ntBASIC1.37□□□□□ -2.19
CopeO89079 Gm27493-201ENSMUST00000184128 78 ntBASIC1.37□□□□□ -2.19
CopeO89079 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC1.37□□□□□ -2.19
CopeO89079 Gm18356-201ENSMUST00000185677 623 ntBASIC1.37□□□□□ -2.19
CopeO89079 Gm37102-201ENSMUST00000195740 1105 ntBASIC1.37□□□□□ -2.19
CopeO89079 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC1.37□□□□□ -2.19
CopeO89079 Gm9377-201ENSMUST00000207227 623 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms