Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Lmx1bO88609 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Lmx1bO88609 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Lmx1bO88609 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Lmx1bO88609 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Lmx1bO88609 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
Lmx1bO88609 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.08□□□□□ -1.92
Lmx1bO88609 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.08□□□□□ -1.92
Lmx1bO88609 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.08□□□□□ -1.92
Lmx1bO88609 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Lmx1bO88609 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.08□□□□□ -1.92
Lmx1bO88609 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Lmx1bO88609 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Lmx1bO88609 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Lmx1bO88609 Gm26500-201ENSMUST00000101867 106 ntBASIC3.08□□□□□ -1.92
Lmx1bO88609 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.08□□□□□ -1.92
Lmx1bO88609 Gm24172-201ENSMUST00000104127 117 ntBASIC3.08□□□□□ -1.92
Lmx1bO88609 Gm24671-201ENSMUST00000104159 158 ntBASIC3.08□□□□□ -1.92
Lmx1bO88609 Gm25875-201ENSMUST00000104323 107 ntBASIC3.08□□□□□ -1.92
Lmx1bO88609 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.08□□□□□ -1.92
Lmx1bO88609 Gm23653-201ENSMUST00000116751 97 ntBASIC3.08□□□□□ -1.92
Lmx1bO88609 Gm15002-201ENSMUST00000118406 452 ntBASIC3.08□□□□□ -1.92
Lmx1bO88609 Gm14541-201ENSMUST00000118985 157 ntBASIC3.08□□□□□ -1.92
Lmx1bO88609 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.08□□□□□ -1.92
Lmx1bO88609 Gm25438-201ENSMUST00000158281 110 ntBASIC3.08□□□□□ -1.92
Lmx1bO88609 Gm25162-201ENSMUST00000158906 159 ntBASIC3.08□□□□□ -1.92
Lmx1bO88609 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.08□□□□□ -1.92
Lmx1bO88609 Gm22308-201ENSMUST00000177609 107 ntBASIC3.08□□□□□ -1.92
Lmx1bO88609 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Lmx1bO88609 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.08□□□□□ -1.92
Lmx1bO88609 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC3.08□□□□□ -1.92
Lmx1bO88609 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC3.08□□□□□ -1.92
Lmx1bO88609 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.08□□□□□ -1.92
Lmx1bO88609 Gm22997-201ENSMUST00000082845 107 ntBASIC3.08□□□□□ -1.92
Lmx1bO88609 Gm10212-201ENSMUST00000087884 324 ntBASIC3.08□□□□□ -1.92
Lmx1bO88609 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Lmx1bO88609 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Lmx1bO88609 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Lmx1bO88609 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.08□□□□□ -1.92
Lmx1bO88609 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Lmx1bO88609 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Lmx1bO88609 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Lmx1bO88609 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Lmx1bO88609 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Lmx1bO88609 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Lmx1bO88609 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.07□□□□□ -1.92
Lmx1bO88609 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Lmx1bO88609 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Lmx1bO88609 Gm12025-201ENSMUST00000117768 144 ntBASIC3.07□□□□□ -1.92
Lmx1bO88609 Gm11572-201ENSMUST00000119164 120 ntBASIC3.07□□□□□ -1.92
Lmx1bO88609 Gm26020-201ENSMUST00000122729 183 ntBASIC3.07□□□□□ -1.92
Lmx1bO88609 Gm20698-201ENSMUST00000175657 233 ntBASIC3.07□□□□□ -1.92
Lmx1bO88609 Gm28030-201ENSMUST00000184987 138 ntBASIC3.07□□□□□ -1.92
Lmx1bO88609 Gm6615-201ENSMUST00000199426 631 ntBASIC3.07□□□□□ -1.92
Lmx1bO88609 Gm32222-201ENSMUST00000203296 298 ntBASIC3.07□□□□□ -1.92
Lmx1bO88609 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC3.07□□□□□ -1.92
Lmx1bO88609 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Lmx1bO88609 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Lmx1bO88609 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.07□□□□□ -1.92
Lmx1bO88609 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.07□□□□□ -1.92
Lmx1bO88609 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Lmx1bO88609 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Lmx1bO88609 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
Lmx1bO88609 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Lmx1bO88609 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC3.06□□□□□ -1.92
Lmx1bO88609 Gm8840-201ENSMUST00000122454 386 ntBASIC3.06□□□□□ -1.92
Lmx1bO88609 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Lmx1bO88609 Gm25391-201ENSMUST00000157342 134 ntBASIC3.06□□□□□ -1.92
Lmx1bO88609 Gm22654-201ENSMUST00000157874 105 ntBASIC3.06□□□□□ -1.92
Lmx1bO88609 Gm20542-201ENSMUST00000174582 372 ntBASIC3.06□□□□□ -1.92
Lmx1bO88609 Gm23355-201ENSMUST00000177614 107 ntBASIC3.06□□□□□ -1.92
Lmx1bO88609 Gm4479-201ENSMUST00000178807 171 ntBASIC3.06□□□□□ -1.92
Lmx1bO88609 Gm23148-201ENSMUST00000180367 107 ntBASIC3.06□□□□□ -1.92
Lmx1bO88609 Gm37713-201ENSMUST00000191746 198 ntBASIC3.06□□□□□ -1.92
Lmx1bO88609 Mir3535-201ENSMUST00000197651 147 ntBASIC3.06□□□□□ -1.92
Lmx1bO88609 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC3.06□□□□□ -1.92
Lmx1bO88609 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.06□□□□□ -1.92
Lmx1bO88609 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.06□□□□□ -1.92
Lmx1bO88609 Gm30674-201ENSMUST00000214523 392 ntBASIC3.06□□□□□ -1.92
Lmx1bO88609 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.06□□□□□ -1.92
Lmx1bO88609 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.06□□□□□ -1.92
Lmx1bO88609 Gm24948-201ENSMUST00000082866 207 ntBASIC3.06□□□□□ -1.92
Lmx1bO88609 Gm25258-201ENSMUST00000083049 107 ntBASIC3.06□□□□□ -1.92
Lmx1bO88609 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.06□□□□□ -1.92
Lmx1bO88609 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Lmx1bO88609 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Lmx1bO88609 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Lmx1bO88609 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Lmx1bO88609 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Lmx1bO88609 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.05□□□□□ -1.92
Lmx1bO88609 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Lmx1bO88609 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.05□□□□□ -1.92
Lmx1bO88609 Gm23705-201ENSMUST00000104370 130 ntBASIC3.05□□□□□ -1.92
Lmx1bO88609 Gm23532-201ENSMUST00000104569 112 ntBASIC3.05□□□□□ -1.92
Lmx1bO88609 Gm13419-201ENSMUST00000121711 271 ntBASIC3.05□□□□□ -1.92
Lmx1bO88609 Gm22482-201ENSMUST00000122563 359 ntBASIC3.05□□□□□ -1.92
Lmx1bO88609 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Lmx1bO88609 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.05□□□□□ -1.92
Lmx1bO88609 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.05□□□□□ -1.92
Lmx1bO88609 Gm17100-201ENSMUST00000168963 272 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms