Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Mir1942-201ENSMUST00000157274 63 ntBASIC2.85□□□□□ -1.95
Cbx4O55187 Gm23120-201ENSMUST00000157654 287 ntBASIC2.85□□□□□ -1.95
Cbx4O55187 Gm22945-201ENSMUST00000158557 157 ntBASIC2.85□□□□□ -1.95
Cbx4O55187 Gm23196-201ENSMUST00000158806 107 ntBASIC2.85□□□□□ -1.95
Cbx4O55187 Gm26400-201ENSMUST00000175012 85 ntBASIC2.85□□□□□ -1.95
Cbx4O55187 Gm28000-201ENSMUST00000184380 85 ntBASIC2.85□□□□□ -1.95
Cbx4O55187 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.85□□□□□ -1.95
Cbx4O55187 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.85□□□□□ -1.95
Cbx4O55187 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.85□□□□□ -1.95
Cbx4O55187 Gm44881-201ENSMUST00000205425 367 ntBASIC2.85□□□□□ -1.95
Cbx4O55187 Gm44794-201ENSMUST00000206550 411 ntBASIC2.85□□□□□ -1.95
Cbx4O55187 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.85□□□□□ -1.95
Cbx4O55187 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.85□□□□□ -1.95
Cbx4O55187 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.85□□□□□ -1.95
Cbx4O55187 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.85□□□□□ -1.95
Cbx4O55187 Gm26457-201ENSMUST00000082678 78 ntBASIC2.85□□□□□ -1.95
Cbx4O55187 Gm26066-201ENSMUST00000083385 109 ntBASIC2.85□□□□□ -1.95
Cbx4O55187 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Cbx4O55187 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
Cbx4O55187 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Cbx4O55187 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Cbx4O55187 Gm650-201ENSMUST00000144428 1551 ntBASIC2.84□□□□□ -1.95
Cbx4O55187 Gm14296-202ENSMUST00000108931 750 ntBASIC2.84□□□□□ -1.95
Cbx4O55187 Gm11065-201ENSMUST00000111462 228 ntBASIC2.84□□□□□ -1.95
Cbx4O55187 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC2.84□□□□□ -1.95
Cbx4O55187 Gm11598-201ENSMUST00000119257 357 ntBASIC2.84□□□□□ -1.95
Cbx4O55187 Gm14877-201ENSMUST00000119803 478 ntBASIC2.84□□□□□ -1.95
Cbx4O55187 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.84□□□□□ -1.95
Cbx4O55187 Gm23325-201ENSMUST00000157422 129 ntBASIC2.84□□□□□ -1.95
Cbx4O55187 Gm23262-201ENSMUST00000158323 168 ntBASIC2.84□□□□□ -1.95
Cbx4O55187 Gm23579-201ENSMUST00000158528 103 ntBASIC2.84□□□□□ -1.95
Cbx4O55187 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Cbx4O55187 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.84□□□□□ -1.95
Cbx4O55187 Mir6346-201ENSMUST00000183982 81 ntBASIC2.84□□□□□ -1.95
Cbx4O55187 Gm38238-201ENSMUST00000194334 346 ntBASIC2.84□□□□□ -1.95
Cbx4O55187 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.84□□□□□ -1.95
Cbx4O55187 Gm19563-201ENSMUST00000222031 270 ntBASIC2.84□□□□□ -1.95
Cbx4O55187 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.84□□□□□ -1.95
Cbx4O55187 Gm24764-201ENSMUST00000083686 199 ntBASIC2.84□□□□□ -1.95
Cbx4O55187 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Cbx4O55187 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
Cbx4O55187 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.83□□□□□ -1.96
Cbx4O55187 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Cbx4O55187 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Cbx4O55187 Mir499-201ENSMUST00000102357 79 ntBASIC2.83□□□□□ -1.96
Cbx4O55187 Gm23747-201ENSMUST00000104228 131 ntBASIC2.83□□□□□ -1.96
Cbx4O55187 Gm25728-201ENSMUST00000104525 159 ntBASIC2.83□□□□□ -1.96
Cbx4O55187 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Cbx4O55187 Gm25539-201ENSMUST00000116886 122 ntBASIC2.83□□□□□ -1.96
Cbx4O55187 Gm12924-201ENSMUST00000121747 318 ntBASIC2.83□□□□□ -1.96
Cbx4O55187 Gm23641-201ENSMUST00000157857 101 ntBASIC2.83□□□□□ -1.96
Cbx4O55187 Gm24997-201ENSMUST00000157910 105 ntBASIC2.83□□□□□ -1.96
Cbx4O55187 Gm44654-201ENSMUST00000208052 329 ntBASIC2.83□□□□□ -1.96
Cbx4O55187 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.83□□□□□ -1.96
Cbx4O55187 AC125020.2-201ENSMUST00000218894 348 ntBASIC2.83□□□□□ -1.96
Cbx4O55187 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.83□□□□□ -1.96
Cbx4O55187 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.83□□□□□ -1.96
Cbx4O55187 Gm23615-201ENSMUST00000082602 65 ntBASIC2.83□□□□□ -1.96
Cbx4O55187 Gm22507-201ENSMUST00000082773 160 ntBASIC2.83□□□□□ -1.96
Cbx4O55187 CT030170.3-201ENSMUST00000221205 1815 ntBASIC2.83□□□□□ -1.96
Cbx4O55187 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Cbx4O55187 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.83□□□□□ -1.96
Cbx4O55187 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Cbx4O55187 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
Cbx4O55187 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Cbx4O55187 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Cbx4O55187 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Cbx4O55187 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
Cbx4O55187 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.82□□□□□ -1.96
Cbx4O55187 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 AC121844.2-201ENSMUST00000219067 2066 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Gm25168-201ENSMUST00000104189 132 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Gm25111-201ENSMUST00000116686 147 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Gm11854-201ENSMUST00000117839 446 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Gm9850-201ENSMUST00000117916 227 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Gm13355-201ENSMUST00000117996 317 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Gm11356-201ENSMUST00000118974 192 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.82□□□□□ -1.96
Cbx4O55187 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC2.82□□□□□ -1.96
Cbx4O55187 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Gm26102-201ENSMUST00000157251 284 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Gm24787-201ENSMUST00000157380 123 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Cbx4O55187 Gm25121-201ENSMUST00000179846 79 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Mir6993-201ENSMUST00000184912 65 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Gm23370-202ENSMUST00000197008 129 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Gm44393-201ENSMUST00000197418 138 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Gm42594-201ENSMUST00000199511 246 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Gm9377-201ENSMUST00000207227 623 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Snora23-201ENSMUST00000082517 184 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Gm25202-201ENSMUST00000082838 191 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.82□□□□□ -1.96
Cbx4O55187 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Cbx4O55187 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Cbx4O55187 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Cbx4O55187 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Cbx4O55187 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 128.1 ms