Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm28744-201ENSMUST00000189939 340 ntBASIC2.39□□□□□ -2.03
Cldn5O54942 Trbv6-201ENSMUST00000193743 276 ntBASIC2.39□□□□□ -2.03
Cldn5O54942 Gm44870-201ENSMUST00000207291 357 ntBASIC2.39□□□□□ -2.03
Cldn5O54942 Gm25130-201ENSMUST00000082650 156 ntBASIC2.39□□□□□ -2.03
Cldn5O54942 Gm22620-201ENSMUST00000082700 133 ntBASIC2.39□□□□□ -2.03
Cldn5O54942 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Cldn5O54942 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Cldn5O54942 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.38□□□□□ -2.03
Cldn5O54942 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.38□□□□□ -2.03
Cldn5O54942 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
Cldn5O54942 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Cldn5O54942 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.38□□□□□ -2.03
Cldn5O54942 Gm22793-201ENSMUST00000157227 330 ntBASIC2.38□□□□□ -2.03
Cldn5O54942 Gm27396-201ENSMUST00000157708 58 ntBASIC2.38□□□□□ -2.03
Cldn5O54942 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.38□□□□□ -2.03
Cldn5O54942 Gm27313-201ENSMUST00000183500 142 ntBASIC2.38□□□□□ -2.03
Cldn5O54942 Gm28343-201ENSMUST00000185386 112 ntBASIC2.38□□□□□ -2.03
Cldn5O54942 Gm43083-201ENSMUST00000199594 476 ntBASIC2.38□□□□□ -2.03
Cldn5O54942 Mir691-201ENSMUST00000199719 78 ntBASIC2.38□□□□□ -2.03
Cldn5O54942 Gm9377-201ENSMUST00000207227 623 ntBASIC2.38□□□□□ -2.03
Cldn5O54942 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.38□□□□□ -2.03
Cldn5O54942 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.38□□□□□ -2.03
Cldn5O54942 Gm9318-201ENSMUST00000222444 438 ntBASIC2.38□□□□□ -2.03
Cldn5O54942 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.38□□□□□ -2.03
Cldn5O54942 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.38□□□□□ -2.03
Cldn5O54942 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.38□□□□□ -2.03
Cldn5O54942 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Cldn5O54942 Gm9762-201ENSMUST00000036976 444 ntBASIC2.38□□□□□ -2.03
Cldn5O54942 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Cldn5O54942 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.38□□□□□ -2.03
Cldn5O54942 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.37□□□□□ -2.03
Cldn5O54942 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC2.37□□□□□ -2.03
Cldn5O54942 Gm23551-201ENSMUST00000116852 121 ntBASIC2.37□□□□□ -2.03
Cldn5O54942 Gm14823-201ENSMUST00000117698 238 ntBASIC2.37□□□□□ -2.03
Cldn5O54942 Gm14652-201ENSMUST00000118479 235 ntBASIC2.37□□□□□ -2.03
Cldn5O54942 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.37□□□□□ -2.03
Cldn5O54942 Gm25339-201ENSMUST00000157458 232 ntBASIC2.37□□□□□ -2.03
Cldn5O54942 Gm23476-201ENSMUST00000158881 274 ntBASIC2.37□□□□□ -2.03
Cldn5O54942 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.37□□□□□ -2.03
Cldn5O54942 Gm27385-201ENSMUST00000184747 104 ntBASIC2.37□□□□□ -2.03
Cldn5O54942 Gm37550-201ENSMUST00000193230 463 ntBASIC2.37□□□□□ -2.03
Cldn5O54942 Mir378a-201ENSMUST00000198300 66 ntBASIC2.37□□□□□ -2.03
Cldn5O54942 Gm44910-201ENSMUST00000208451 396 ntBASIC2.37□□□□□ -2.03
Cldn5O54942 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.37□□□□□ -2.03
Cldn5O54942 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.37□□□□□ -2.03
Cldn5O54942 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cldn5O54942 Gm22577-201ENSMUST00000083731 109 ntBASIC2.37□□□□□ -2.03
Cldn5O54942 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC2.37□□□□□ -2.03
Cldn5O54942 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC2.37□□□□□ -2.03
Cldn5O54942 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.37□□□□□ -2.03
Cldn5O54942 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cldn5O54942 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Cldn5O54942 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Cldn5O54942 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Cldn5O54942 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Cldn5O54942 Gm11460-201ENSMUST00000118200 361 ntBASIC2.36□□□□□ -2.03
Cldn5O54942 Gm25910-201ENSMUST00000157620 140 ntBASIC2.36□□□□□ -2.03
Cldn5O54942 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Cldn5O54942 Gm28627-201ENSMUST00000186141 453 ntBASIC2.36□□□□□ -2.03
Cldn5O54942 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.36□□□□□ -2.03
Cldn5O54942 Gm44024-201ENSMUST00000203008 476 ntBASIC2.36□□□□□ -2.03
Cldn5O54942 AC164567.2-201ENSMUST00000219363 445 ntBASIC2.36□□□□□ -2.03
Cldn5O54942 AC123062.1-201ENSMUST00000221287 481 ntBASIC2.36□□□□□ -2.03
Cldn5O54942 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.36□□□□□ -2.03
Cldn5O54942 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Cldn5O54942 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.36□□□□□ -2.03
Cldn5O54942 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Cldn5O54942 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Cldn5O54942 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Cldn5O54942 Gm14390-201ENSMUST00000117505 1695 ntBASIC2.35□□□□□ -2.03
Cldn5O54942 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Cldn5O54942 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Cldn5O54942 Gm22834-201ENSMUST00000102021 79 ntBASIC2.35□□□□□ -2.03
Cldn5O54942 Mir344e-201ENSMUST00000104677 66 ntBASIC2.35□□□□□ -2.03
Cldn5O54942 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Cldn5O54942 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.35□□□□□ -2.03
Cldn5O54942 Gm23000-201ENSMUST00000157083 139 ntBASIC2.35□□□□□ -2.03
Cldn5O54942 Gm25392-201ENSMUST00000157335 297 ntBASIC2.35□□□□□ -2.03
Cldn5O54942 Gm23829-201ENSMUST00000157392 270 ntBASIC2.35□□□□□ -2.03
Cldn5O54942 Gm23022-201ENSMUST00000158768 180 ntBASIC2.35□□□□□ -2.03
Cldn5O54942 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.35□□□□□ -2.03
Cldn5O54942 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Cldn5O54942 Gm26652-202ENSMUST00000181672 475 ntBASIC2.35□□□□□ -2.03
Cldn5O54942 Gm43510-201ENSMUST00000197922 353 ntBASIC2.35□□□□□ -2.03
Cldn5O54942 Gm43587-201ENSMUST00000199590 204 ntBASIC2.35□□□□□ -2.03
Cldn5O54942 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.35□□□□□ -2.03
Cldn5O54942 Gm45791-201ENSMUST00000212908 352 ntBASIC2.35□□□□□ -2.03
Cldn5O54942 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Cldn5O54942 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Cldn5O54942 Gm18696-201ENSMUST00000220103 274 ntBASIC2.35□□□□□ -2.03
Cldn5O54942 AC129208.2-201ENSMUST00000228506 320 ntBASIC2.35□□□□□ -2.03
Cldn5O54942 Gm25475-201ENSMUST00000082825 180 ntBASIC2.35□□□□□ -2.03
Cldn5O54942 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Cldn5O54942 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Cldn5O54942 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Cldn5O54942 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Cldn5O54942 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Cldn5O54942 Gm13378-201ENSMUST00000117483 336 ntBASIC2.34□□□□□ -2.03
Cldn5O54942 Gm12770-201ENSMUST00000121734 462 ntBASIC2.34□□□□□ -2.03
Cldn5O54942 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 144.1 ms