Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm25409-201ENSMUST00000083764 131 ntBASIC1.01□□□□□ -2.25
Hmgb3O54879 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Hmgb3O54879 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Hmgb3O54879 Gm14359-201ENSMUST00000118883 424 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm12304-201ENSMUST00000120312 385 ntBASIC1□□□□□ -2.25
Hmgb3O54879 AA413626-201ENSMUST00000121125 494 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm24839-201ENSMUST00000122602 107 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm15274-201ENSMUST00000131442 291 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm21979-201ENSMUST00000139887 291 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm9498-201ENSMUST00000140849 291 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm14368-201ENSMUST00000145305 415 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1□□□□□ -2.25
Hmgb3O54879 Gm15259-201ENSMUST00000151262 291 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm23752-201ENSMUST00000157584 115 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm27396-201ENSMUST00000157708 58 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm24419-201ENSMUST00000157875 332 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm22099-201ENSMUST00000157925 123 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm25454-201ENSMUST00000157947 315 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm22731-201ENSMUST00000158086 94 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1□□□□□ -2.25
Hmgb3O54879 Gm27517-201ENSMUST00000184347 236 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1□□□□□ -2.25
Hmgb3O54879 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Hmgb3O54879 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1□□□□□ -2.25
Hmgb3O54879 Gm43723-201ENSMUST00000196886 189 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm44125-201ENSMUST00000203068 448 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm44844-201ENSMUST00000207242 336 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm45207-201ENSMUST00000207469 145 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm46103-201ENSMUST00000217614 341 ntBASIC1□□□□□ -2.25
Hmgb3O54879 AC138401.1-201ENSMUST00000221533 116 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm23517-201ENSMUST00000082830 192 ntBASIC1□□□□□ -2.25
Hmgb3O54879 Gm44821-201ENSMUST00000208212 2002 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Hmgb3O54879 Mir758-201ENSMUST00000103260 81 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Hmgb3O54879 Gm26147-201ENSMUST00000104479 114 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Hmgb3O54879 Gm12016-201ENSMUST00000119079 681 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Gm15309-201ENSMUST00000121644 240 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Gm25047-201ENSMUST00000122667 104 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Gm23983-201ENSMUST00000157142 114 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Gm23670-201ENSMUST00000157469 119 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Gm16584-201ENSMUST00000159267 189 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Gm17377-201ENSMUST00000165184 207 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Traj60-201ENSMUST00000167781 54 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Gm25069-201ENSMUST00000175238 86 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Mir5118-201ENSMUST00000175551 67 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Gm21978-201ENSMUST00000179696 377 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Mir7068-201ENSMUST00000183439 74 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Trbv7-201ENSMUST00000193339 402 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.99□□□□□ -2.25
Hmgb3O54879 Gm9377-201ENSMUST00000207227 623 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Gm45456-201ENSMUST00000210841 243 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC0.99□□□□□ -2.25
Hmgb3O54879 AC156795.1-201ENSMUST00000214655 414 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC0.99□□□□□ -2.25
Hmgb3O54879 Gm21937-201ENSMUST00000222825 218 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Hmgb3O54879 Gm22062-201ENSMUST00000082563 107 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Gm5670-201ENSMUST00000093546 372 ntBASIC0.99□□□□□ -2.25
Hmgb3O54879 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC0.99□□□□□ -2.25
Hmgb3O54879 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Hmgb3O54879 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Hmgb3O54879 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC0.98□□□□□ -2.25
Hmgb3O54879 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.98□□□□□ -2.25
Hmgb3O54879 Gm25376-201ENSMUST00000104340 133 ntBASIC0.98□□□□□ -2.25
Hmgb3O54879 Gm6664-201ENSMUST00000119138 468 ntBASIC0.98□□□□□ -2.25
Hmgb3O54879 Mir1967-201ENSMUST00000157789 82 ntBASIC0.98□□□□□ -2.25
Hmgb3O54879 Gm24960-201ENSMUST00000157923 90 ntBASIC0.98□□□□□ -2.25
Hmgb3O54879 Gm25836-201ENSMUST00000158918 123 ntBASIC0.98□□□□□ -2.25
Hmgb3O54879 Gm25707-201ENSMUST00000175120 96 ntBASIC0.98□□□□□ -2.25
Hmgb3O54879 Gm21754-201ENSMUST00000177550 479 ntBASIC0.98□□□□□ -2.25
Hmgb3O54879 Gm26177-201ENSMUST00000178683 107 ntBASIC0.98□□□□□ -2.25
Hmgb3O54879 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC0.98□□□□□ -2.25
Hmgb3O54879 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC0.98□□□□□ -2.25
Hmgb3O54879 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC0.98□□□□□ -2.25
Hmgb3O54879 Gm43232-201ENSMUST00000201346 364 ntBASIC0.98□□□□□ -2.25
Hmgb3O54879 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC0.98□□□□□ -2.25
Hmgb3O54879 Gm46994-201ENSMUST00000221523 219 ntBASIC0.98□□□□□ -2.25
Hmgb3O54879 AC120540.1-201ENSMUST00000221879 324 ntBASIC0.98□□□□□ -2.25
Hmgb3O54879 Gm5955-201ENSMUST00000222712 219 ntBASIC0.98□□□□□ -2.25
Hmgb3O54879 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC0.98□□□□□ -2.25
Hmgb3O54879 AC121114.1-201ENSMUST00000228522 570 ntBASIC0.98□□□□□ -2.25
Hmgb3O54879 Gm26493-201ENSMUST00000083155 136 ntBASIC0.98□□□□□ -2.25
Hmgb3O54879 Gm23454-201ENSMUST00000083332 133 ntBASIC0.98□□□□□ -2.25
Hmgb3O54879 BC022960-201ENSMUST00000119987 1815 ntBASIC0.98□□□□□ -2.25
Hmgb3O54879 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
Hmgb3O54879 Gm24079-201ENSMUST00000104352 132 ntBASIC0.97□□□□□ -2.25
Hmgb3O54879 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC0.97□□□□□ -2.25
Hmgb3O54879 Gm26049-201ENSMUST00000157313 108 ntBASIC0.97□□□□□ -2.25
Hmgb3O54879 Gm23538-201ENSMUST00000157535 101 ntBASIC0.97□□□□□ -2.25
Hmgb3O54879 Gm24394-201ENSMUST00000158141 123 ntBASIC0.97□□□□□ -2.25
Hmgb3O54879 Gm24137-201ENSMUST00000180055 79 ntBASIC0.97□□□□□ -2.25
Hmgb3O54879 Gm22391-201ENSMUST00000180356 79 ntBASIC0.97□□□□□ -2.25
Hmgb3O54879 Gm27942-201ENSMUST00000184669 101 ntBASIC0.97□□□□□ -2.25
Hmgb3O54879 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC0.97□□□□□ -2.25
Hmgb3O54879 Gm45226-201ENSMUST00000206602 288 ntBASIC0.97□□□□□ -2.25
Hmgb3O54879 Gm45268-201ENSMUST00000210046 370 ntBASIC0.97□□□□□ -2.25
Hmgb3O54879 AC153522.1-201ENSMUST00000220047 1090 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 195.2 ms