Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Mir196b-201ENSMUST00000083509 85 ntBASIC1.13□□□□□ -2.23
Sdc4O35988 Gm26327-201ENSMUST00000093724 111 ntBASIC1.13□□□□□ -2.23
Sdc4O35988 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Sdc4O35988 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.12□□□□□ -2.23
Sdc4O35988 Gm23705-201ENSMUST00000104370 130 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm11845-201ENSMUST00000117886 327 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm12656-201ENSMUST00000118149 577 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm11813-201ENSMUST00000118586 291 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm14359-201ENSMUST00000118883 424 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm14428-201ENSMUST00000120408 822 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm14678-201ENSMUST00000121396 482 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm12372-201ENSMUST00000121654 768 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm12045-201ENSMUST00000122122 573 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm15274-201ENSMUST00000131442 291 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm21979-201ENSMUST00000139887 291 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm9498-201ENSMUST00000140849 291 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm14368-201ENSMUST00000145305 415 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm15259-201ENSMUST00000151262 291 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm15279-201ENSMUST00000155593 288 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm22217-201ENSMUST00000157556 313 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm24846-201ENSMUST00000158033 108 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm24942-201ENSMUST00000158328 114 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm22663-201ENSMUST00000158721 102 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Mir1954-201ENSMUST00000175595 86 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Mir6370-201ENSMUST00000183510 120 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm27342-201ENSMUST00000183530 109 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm44324-201ENSMUST00000198517 135 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Trdv3-201ENSMUST00000198551 309 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Sdc4O35988 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Sdc4O35988 Gm23246-201ENSMUST00000083371 67 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm24254-201ENSMUST00000083702 104 ntBASIC1.12□□□□□ -2.23
Sdc4O35988 Gm25313-201ENSMUST00000101817 116 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Mir223-201ENSMUST00000102112 110 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm26301-201ENSMUST00000104813 95 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm26089-201ENSMUST00000157898 107 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm22527-201ENSMUST00000158816 106 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm17061-201ENSMUST00000163167 499 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm23287-201ENSMUST00000179427 116 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm23143-201ENSMUST00000180137 116 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Mir6381-201ENSMUST00000183426 87 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm28838-201ENSMUST00000186338 315 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm29635-201ENSMUST00000187221 315 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm29026-201ENSMUST00000187787 315 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm28797-201ENSMUST00000188543 315 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm28855-201ENSMUST00000188680 315 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm28705-201ENSMUST00000189548 315 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm28939-201ENSMUST00000190351 315 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm28223-201ENSMUST00000190469 315 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm29092-201ENSMUST00000190768 315 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm37005-201ENSMUST00000193281 1164 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Sdc4O35988 Gm42774-201ENSMUST00000198854 283 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.11□□□□□ -2.23
Sdc4O35988 Gm43493-201ENSMUST00000199837 202 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm45071-201ENSMUST00000205353 571 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.11□□□□□ -2.23
Sdc4O35988 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm18188-201ENSMUST00000219386 478 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm22061-201ENSMUST00000082557 107 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm25799-201ENSMUST00000082643 107 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm22265-201ENSMUST00000082947 116 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm24871-201ENSMUST00000083099 116 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm25755-201ENSMUST00000083396 107 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Mir421-201ENSMUST00000083575 76 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Rnu5g-201ENSMUST00000093721 116 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm43924-201ENSMUST00000204851 1736 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.11□□□□□ -2.23
Sdc4O35988 Mir653-201ENSMUST00000102402 85 ntBASIC1.1□□□□□ -2.23
Sdc4O35988 Mdga2-203ENSMUST00000113942 423 ntBASIC1.1□□□□□ -2.23
Sdc4O35988 Gm14530-201ENSMUST00000122391 333 ntBASIC1.1□□□□□ -2.23
Sdc4O35988 Gm25047-201ENSMUST00000122667 104 ntBASIC1.1□□□□□ -2.23
Sdc4O35988 Gm22452-201ENSMUST00000122804 104 ntBASIC1.1□□□□□ -2.23
Sdc4O35988 Gm24960-201ENSMUST00000157923 90 ntBASIC1.1□□□□□ -2.23
Sdc4O35988 Gm24837-201ENSMUST00000158683 81 ntBASIC1.1□□□□□ -2.23
Sdc4O35988 Gm21744-201ENSMUST00000178403 662 ntBASIC1.1□□□□□ -2.23
Sdc4O35988 Gm21171-201ENSMUST00000180048 673 ntBASIC1.1□□□□□ -2.23
Sdc4O35988 Gm29413-201ENSMUST00000186019 880 ntBASIC1.1□□□□□ -2.23
Sdc4O35988 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Sdc4O35988 Gm28700-201ENSMUST00000187614 579 ntBASIC1.1□□□□□ -2.23
Sdc4O35988 Gm29639-201ENSMUST00000188375 580 ntBASIC1.1□□□□□ -2.23
Sdc4O35988 Gm28843-201ENSMUST00000189198 678 ntBASIC1.1□□□□□ -2.23
Sdc4O35988 Gm29546-201ENSMUST00000191171 678 ntBASIC1.1□□□□□ -2.23
Sdc4O35988 Gm37568-201ENSMUST00000191755 364 ntBASIC1.1□□□□□ -2.23
Sdc4O35988 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.1□□□□□ -2.23
Sdc4O35988 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC1.1□□□□□ -2.23
Sdc4O35988 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC1.1□□□□□ -2.23
Sdc4O35988 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Sdc4O35988 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Sdc4O35988 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Sdc4O35988 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.09□□□□□ -2.23
Sdc4O35988 Gm22496-201ENSMUST00000104493 88 ntBASIC1.09□□□□□ -2.23
Sdc4O35988 Gm22091-201ENSMUST00000116908 127 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms