Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm29635-201ENSMUST00000187221 315 ntBASIC2.8□□□□□ -1.96
Clk3O35492 Gm29026-201ENSMUST00000187787 315 ntBASIC2.8□□□□□ -1.96
Clk3O35492 Gm28797-201ENSMUST00000188543 315 ntBASIC2.8□□□□□ -1.96
Clk3O35492 Gm28855-201ENSMUST00000188680 315 ntBASIC2.8□□□□□ -1.96
Clk3O35492 Gm28705-201ENSMUST00000189548 315 ntBASIC2.8□□□□□ -1.96
Clk3O35492 Gm28939-201ENSMUST00000190351 315 ntBASIC2.8□□□□□ -1.96
Clk3O35492 Gm28223-201ENSMUST00000190469 315 ntBASIC2.8□□□□□ -1.96
Clk3O35492 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.8□□□□□ -1.96
Clk3O35492 Gm29092-201ENSMUST00000190768 315 ntBASIC2.8□□□□□ -1.96
Clk3O35492 Trav15d-3-201ENSMUST00000198604 167 ntBASIC2.8□□□□□ -1.96
Clk3O35492 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.8□□□□□ -1.96
Clk3O35492 AC102369.1-201ENSMUST00000218415 373 ntBASIC2.8□□□□□ -1.96
Clk3O35492 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.8□□□□□ -1.96
Clk3O35492 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.8□□□□□ -1.96
Clk3O35492 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Clk3O35492 Gm22620-201ENSMUST00000082700 133 ntBASIC2.8□□□□□ -1.96
Clk3O35492 Gm23721-201ENSMUST00000083005 107 ntBASIC2.8□□□□□ -1.96
Clk3O35492 Mir184-201ENSMUST00000083662 69 ntBASIC2.8□□□□□ -1.96
Clk3O35492 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Clk3O35492 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Clk3O35492 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Clk3O35492 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Clk3O35492 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Clk3O35492 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Clk3O35492 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.79□□□□□ -1.96
Clk3O35492 Gm650-201ENSMUST00000144428 1551 ntBASIC2.79□□□□□ -1.96
Clk3O35492 Gm24127-201ENSMUST00000104110 130 ntBASIC2.79□□□□□ -1.96
Clk3O35492 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Clk3O35492 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Clk3O35492 Gm12819-201ENSMUST00000122223 629 ntBASIC2.79□□□□□ -1.96
Clk3O35492 Gm22073-201ENSMUST00000122668 189 ntBASIC2.79□□□□□ -1.96
Clk3O35492 Gm27926-201ENSMUST00000157180 66 ntBASIC2.79□□□□□ -1.96
Clk3O35492 Gm24481-201ENSMUST00000157210 102 ntBASIC2.79□□□□□ -1.96
Clk3O35492 Gm22187-201ENSMUST00000157819 129 ntBASIC2.79□□□□□ -1.96
Clk3O35492 Gm26406-201ENSMUST00000158503 124 ntBASIC2.79□□□□□ -1.96
Clk3O35492 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC2.79□□□□□ -1.96
Clk3O35492 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC2.79□□□□□ -1.96
Clk3O35492 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC2.79□□□□□ -1.96
Clk3O35492 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC2.79□□□□□ -1.96
Clk3O35492 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC2.79□□□□□ -1.96
Clk3O35492 Gm21893-201ENSMUST00000179119 397 ntBASIC2.79□□□□□ -1.96
Clk3O35492 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC2.79□□□□□ -1.96
Clk3O35492 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC2.79□□□□□ -1.96
Clk3O35492 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC2.79□□□□□ -1.96
Clk3O35492 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Clk3O35492 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.79□□□□□ -1.96
Clk3O35492 Gm9377-201ENSMUST00000207227 623 ntBASIC2.79□□□□□ -1.96
Clk3O35492 Gm44909-201ENSMUST00000208756 165 ntBASIC2.79□□□□□ -1.96
Clk3O35492 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Clk3O35492 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.79□□□□□ -1.96
Clk3O35492 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
Clk3O35492 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Clk3O35492 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Clk3O35492 Gm22939-201ENSMUST00000103958 131 ntBASIC2.78□□□□□ -1.96
Clk3O35492 Mir669i-201ENSMUST00000117007 127 ntBASIC2.78□□□□□ -1.96
Clk3O35492 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.78□□□□□ -1.96
Clk3O35492 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC2.78□□□□□ -1.96
Clk3O35492 Gm25054-201ENSMUST00000157370 97 ntBASIC2.78□□□□□ -1.96
Clk3O35492 Gm23865-201ENSMUST00000157723 97 ntBASIC2.78□□□□□ -1.96
Clk3O35492 Gm22839-201ENSMUST00000158436 304 ntBASIC2.78□□□□□ -1.96
Clk3O35492 Gm25486-201ENSMUST00000158726 63 ntBASIC2.78□□□□□ -1.96
Clk3O35492 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.78□□□□□ -1.96
Clk3O35492 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.78□□□□□ -1.96
Clk3O35492 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
Clk3O35492 Gm5329-201ENSMUST00000186898 463 ntBASIC2.78□□□□□ -1.96
Clk3O35492 Gm20058-201ENSMUST00000186939 284 ntBASIC2.78□□□□□ -1.96
Clk3O35492 Gm29452-201ENSMUST00000187996 313 ntBASIC2.78□□□□□ -1.96
Clk3O35492 Gm43901-201ENSMUST00000203247 453 ntBASIC2.78□□□□□ -1.96
Clk3O35492 Gm44844-201ENSMUST00000207242 336 ntBASIC2.78□□□□□ -1.96
Clk3O35492 Gm45403-201ENSMUST00000209453 276 ntBASIC2.78□□□□□ -1.96
Clk3O35492 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.78□□□□□ -1.96
Clk3O35492 Gm24623-201ENSMUST00000082616 194 ntBASIC2.78□□□□□ -1.96
Clk3O35492 Gm25512-201ENSMUST00000083863 107 ntBASIC2.78□□□□□ -1.96
Clk3O35492 Gm26327-201ENSMUST00000093724 111 ntBASIC2.78□□□□□ -1.96
Clk3O35492 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Clk3O35492 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.78□□□□□ -1.96
Clk3O35492 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Clk3O35492 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.78□□□□□ -1.96
Clk3O35492 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
Clk3O35492 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
Clk3O35492 Gm15183-201ENSMUST00000118933 348 ntBASIC2.77□□□□□ -1.97
Clk3O35492 Gm11798-201ENSMUST00000119150 421 ntBASIC2.77□□□□□ -1.97
Clk3O35492 Gm12155-201ENSMUST00000121267 160 ntBASIC2.77□□□□□ -1.97
Clk3O35492 Gm14678-201ENSMUST00000121396 482 ntBASIC2.77□□□□□ -1.97
Clk3O35492 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.77□□□□□ -1.97
Clk3O35492 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.77□□□□□ -1.97
Clk3O35492 Gm25384-201ENSMUST00000157807 105 ntBASIC2.77□□□□□ -1.97
Clk3O35492 Gm23641-201ENSMUST00000157857 101 ntBASIC2.77□□□□□ -1.97
Clk3O35492 Gm5967-201ENSMUST00000172723 494 ntBASIC2.77□□□□□ -1.97
Clk3O35492 Gm23933-201ENSMUST00000178405 79 ntBASIC2.77□□□□□ -1.97
Clk3O35492 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Clk3O35492 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.77□□□□□ -1.97
Clk3O35492 AC116460.1-201ENSMUST00000219040 313 ntBASIC2.77□□□□□ -1.97
Clk3O35492 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.77□□□□□ -1.97
Clk3O35492 Snora23-201ENSMUST00000082517 184 ntBASIC2.77□□□□□ -1.97
Clk3O35492 Gm22443-201ENSMUST00000082890 107 ntBASIC2.77□□□□□ -1.97
Clk3O35492 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
Clk3O35492 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Clk3O35492 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.76□□□□□ -1.97
Clk3O35492 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms