Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 AC115878.1-201ENSMUST00000227247 334 ntBASIC0.4□□□□□ -2.35
Ccdc180J3QNE4 Gm13806-201ENSMUST00000117822 325 ntBASIC0.39□□□□□ -2.35
Ccdc180J3QNE4 Gm13085-201ENSMUST00000118356 171 ntBASIC0.39□□□□□ -2.35
Ccdc180J3QNE4 Gm16428-201ENSMUST00000121193 723 ntBASIC0.39□□□□□ -2.35
Ccdc180J3QNE4 Gm13356-201ENSMUST00000121678 335 ntBASIC0.39□□□□□ -2.35
Ccdc180J3QNE4 Gm27717-201ENSMUST00000183933 151 ntBASIC0.39□□□□□ -2.35
Ccdc180J3QNE4 Gm44727-201ENSMUST00000204225 451 ntBASIC0.39□□□□□ -2.35
Ccdc180J3QNE4 AC124356.2-201ENSMUST00000221874 336 ntBASIC0.39□□□□□ -2.35
Ccdc180J3QNE4 Gm23247-201ENSMUST00000083373 107 ntBASIC0.39□□□□□ -2.35
Ccdc180J3QNE4 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Ccdc180J3QNE4 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Ccdc180J3QNE4 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC0.38□□□□□ -2.35
Ccdc180J3QNE4 Gm19280-201ENSMUST00000190191 205 ntBASIC0.38□□□□□ -2.35
Ccdc180J3QNE4 Gm37418-201ENSMUST00000195031 274 ntBASIC0.38□□□□□ -2.35
Ccdc180J3QNE4 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.38□□□□□ -2.35
Ccdc180J3QNE4 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC0.38□□□□□ -2.35
Ccdc180J3QNE4 Gm4921-201ENSMUST00000219804 992 ntBASIC0.38□□□□□ -2.35
Ccdc180J3QNE4 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.38□□□□□ -2.35
Ccdc180J3QNE4 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Ccdc180J3QNE4 Gm11483-201ENSMUST00000119839 247 ntBASIC0.37□□□□□ -2.35
Ccdc180J3QNE4 Mir5129-201ENSMUST00000174938 78 ntBASIC0.37□□□□□ -2.35
Ccdc180J3QNE4 Gm23415-201ENSMUST00000175519 83 ntBASIC0.37□□□□□ -2.35
Ccdc180J3QNE4 AC123803.1-201ENSMUST00000216093 189 ntBASIC0.37□□□□□ -2.35
Ccdc180J3QNE4 AC167977.1-201ENSMUST00000221384 234 ntBASIC0.37□□□□□ -2.35
Ccdc180J3QNE4 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Ccdc180J3QNE4 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC0.37□□□□□ -2.35
Ccdc180J3QNE4 Gm27977-201ENSMUST00000185159 111 ntBASIC0.37□□□□□ -2.35
Ccdc180J3QNE4 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.37□□□□□ -2.35
Ccdc180J3QNE4 Gm25128-201ENSMUST00000083339 76 ntBASIC0.37□□□□□ -2.35
Ccdc180J3QNE4 Gm25335-201ENSMUST00000158043 103 ntBASIC0.36□□□□□ -2.35
Ccdc180J3QNE4 Gm25491-201ENSMUST00000158733 308 ntBASIC0.36□□□□□ -2.35
Ccdc180J3QNE4 Mir6904-201ENSMUST00000183443 67 ntBASIC0.36□□□□□ -2.35
Ccdc180J3QNE4 Npn2-202ENSMUST00000189275 235 ntBASIC0.36□□□□□ -2.35
Ccdc180J3QNE4 Gm37713-201ENSMUST00000191746 198 ntBASIC0.36□□□□□ -2.35
Ccdc180J3QNE4 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC0.36□□□□□ -2.35
Ccdc180J3QNE4 Gm24229-201ENSMUST00000158830 118 ntBASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm2966-201ENSMUST00000166052 481 ntBASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm17204-201ENSMUST00000167936 478 ntBASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm20794-201ENSMUST00000177626 628 ntBASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm28356-202ENSMUST00000187566 858 ntBASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm20885-201ENSMUST00000190192 654 ntBASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm33571-201ENSMUST00000193271 657 ntBASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm36866-201ENSMUST00000193343 657 ntBASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm36047-201ENSMUST00000193659 657 ntBASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm20857-201ENSMUST00000194766 657 ntBASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm20858-201ENSMUST00000195459 657 ntBASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm30638-201ENSMUST00000195570 656 ntBASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Mir6915-201ENSMUST00000198839 69 ntBASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm19147-201ENSMUST00000199622 652 ntBASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm44211-201ENSMUST00000204867 145 ntBASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 AC073947.3-201ENSMUST00000215576 766 ntBASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Ccdc180J3QNE4 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC0.34□□□□□ -2.35
Ccdc180J3QNE4 Gm24959-201ENSMUST00000157924 146 ntBASIC0.34□□□□□ -2.35
Ccdc180J3QNE4 Gm17100-201ENSMUST00000168963 272 ntBASIC0.34□□□□□ -2.35
Ccdc180J3QNE4 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Ccdc180J3QNE4 Gm12825-201ENSMUST00000120249 563 ntBASIC0.33□□□□□ -2.36
Ccdc180J3QNE4 Gm22477-201ENSMUST00000122569 316 ntBASIC0.33□□□□□ -2.36
Ccdc180J3QNE4 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC0.33□□□□□ -2.36
Ccdc180J3QNE4 Gm22131-201ENSMUST00000178415 94 ntBASIC0.33□□□□□ -2.36
Ccdc180J3QNE4 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
Ccdc180J3QNE4 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC0.33□□□□□ -2.36
Ccdc180J3QNE4 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC0.33□□□□□ -2.36
Ccdc180J3QNE4 Gm10264-201ENSMUST00000220589 429 ntBASIC0.33□□□□□ -2.36
Ccdc180J3QNE4 Gm6461-201ENSMUST00000120015 633 ntBASIC0.33□□□□□ -2.36
Ccdc180J3QNE4 Gm37098-201ENSMUST00000192290 244 ntBASIC0.33□□□□□ -2.36
Ccdc180J3QNE4 Gm40810-201ENSMUST00000219149 253 ntBASIC0.33□□□□□ -2.36
Ccdc180J3QNE4 AC157772.2-201ENSMUST00000228202 259 ntBASIC0.33□□□□□ -2.36
Ccdc180J3QNE4 Igkv13-87-201ENSMUST00000114214 286 ntBASIC0.32□□□□□ -2.36
Ccdc180J3QNE4 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC0.32□□□□□ -2.36
Ccdc180J3QNE4 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
Ccdc180J3QNE4 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.32□□□□□ -2.36
Ccdc180J3QNE4 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC0.31□□□□□ -2.36
Ccdc180J3QNE4 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC0.31□□□□□ -2.36
Ccdc180J3QNE4 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC0.31□□□□□ -2.36
Ccdc180J3QNE4 Gm22293-201ENSMUST00000083314 109 ntBASIC0.31□□□□□ -2.36
Ccdc180J3QNE4 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.31□□□□□ -2.36
Ccdc180J3QNE4 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC0.3□□□□□ -2.36
Ccdc180J3QNE4 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC0.3□□□□□ -2.36
Ccdc180J3QNE4 Gm22382-201ENSMUST00000158185 130 ntBASIC0.3□□□□□ -2.36
Ccdc180J3QNE4 Gm24221-201ENSMUST00000158833 313 ntBASIC0.3□□□□□ -2.36
Ccdc180J3QNE4 Gm7953-201ENSMUST00000168278 469 ntBASIC0.3□□□□□ -2.36
Ccdc180J3QNE4 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.3□□□□□ -2.36
Ccdc180J3QNE4 Gm37568-201ENSMUST00000191755 364 ntBASIC0.3□□□□□ -2.36
Ccdc180J3QNE4 AC154296.1-201ENSMUST00000198150 67 ntBASIC0.3□□□□□ -2.36
Ccdc180J3QNE4 Gm43142-201ENSMUST00000198670 361 ntBASIC0.3□□□□□ -2.36
Ccdc180J3QNE4 Gm44989-201ENSMUST00000204749 217 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms