Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.42□□□□□ -2.18
Chd3B1AR17 Gm28412-201ENSMUST00000187243 177 ntBASIC1.42□□□□□ -2.18
Chd3B1AR17 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Chd3B1AR17 Gm3333-202ENSMUST00000221763 1044 ntBASIC1.42□□□□□ -2.18
Chd3B1AR17 Gm13355-201ENSMUST00000117996 317 ntBASIC1.41□□□□□ -2.18
Chd3B1AR17 Gm22315-201ENSMUST00000158010 143 ntBASIC1.41□□□□□ -2.18
Chd3B1AR17 Gm16162-201ENSMUST00000162296 297 ntBASIC1.41□□□□□ -2.18
Chd3B1AR17 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
Chd3B1AR17 Gm23151-201ENSMUST00000178061 107 ntBASIC1.41□□□□□ -2.18
Chd3B1AR17 Gm27265-201ENSMUST00000183559 77 ntBASIC1.41□□□□□ -2.18
Chd3B1AR17 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
Chd3B1AR17 Mir219b-201ENSMUST00000198317 65 ntBASIC1.41□□□□□ -2.18
Chd3B1AR17 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Chd3B1AR17 Gm34701-202ENSMUST00000204685 360 ntBASIC1.41□□□□□ -2.18
Chd3B1AR17 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Chd3B1AR17 Gm26206-201ENSMUST00000082908 110 ntBASIC1.41□□□□□ -2.18
Chd3B1AR17 Mir141-201ENSMUST00000083540 72 ntBASIC1.41□□□□□ -2.18
Chd3B1AR17 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
Chd3B1AR17 Gm14899-201ENSMUST00000118673 548 ntBASIC1.41□□□□□ -2.18
Chd3B1AR17 Gm16428-201ENSMUST00000121193 723 ntBASIC1.41□□□□□ -2.18
Chd3B1AR17 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC1.41□□□□□ -2.18
Chd3B1AR17 Gm29263-201ENSMUST00000188718 463 ntBASIC1.41□□□□□ -2.18
Chd3B1AR17 Gm28384-201ENSMUST00000189079 463 ntBASIC1.41□□□□□ -2.18
Chd3B1AR17 Gm18991-201ENSMUST00000209225 746 ntBASIC1.41□□□□□ -2.18
Chd3B1AR17 Gm18488-201ENSMUST00000215082 364 ntBASIC1.41□□□□□ -2.18
Chd3B1AR17 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.41□□□□□ -2.18
Chd3B1AR17 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Chd3B1AR17 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Chd3B1AR17 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Chd3B1AR17 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.4□□□□□ -2.19
Chd3B1AR17 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.4□□□□□ -2.19
Chd3B1AR17 Mir8106-201ENSMUST00000184520 139 ntBASIC1.4□□□□□ -2.19
Chd3B1AR17 Gm29460-201ENSMUST00000188607 714 ntBASIC1.4□□□□□ -2.19
Chd3B1AR17 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC1.4□□□□□ -2.19
Chd3B1AR17 Gm37987-201ENSMUST00000194999 825 ntBASIC1.4□□□□□ -2.19
Chd3B1AR17 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC1.4□□□□□ -2.19
Chd3B1AR17 AC133076.1-201ENSMUST00000228074 484 ntBASIC1.4□□□□□ -2.19
Chd3B1AR17 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Chd3B1AR17 Gm26203-201ENSMUST00000082911 114 ntBASIC1.4□□□□□ -2.19
Chd3B1AR17 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
Chd3B1AR17 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Chd3B1AR17 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Chd3B1AR17 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Chd3B1AR17 Gm43216-201ENSMUST00000196295 1333 ntBASIC1.4□□□□□ -2.19
Chd3B1AR17 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Chd3B1AR17 Gm24908-201ENSMUST00000157294 127 ntBASIC1.39□□□□□ -2.19
Chd3B1AR17 Gm22098-201ENSMUST00000157930 85 ntBASIC1.39□□□□□ -2.19
Chd3B1AR17 Gm24080-201ENSMUST00000175178 232 ntBASIC1.39□□□□□ -2.19
Chd3B1AR17 Mir3098-201ENSMUST00000175416 87 ntBASIC1.39□□□□□ -2.19
Chd3B1AR17 Gm21726-201ENSMUST00000179654 392 ntBASIC1.39□□□□□ -2.19
Chd3B1AR17 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC1.39□□□□□ -2.19
Chd3B1AR17 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Chd3B1AR17 Gm18635-201ENSMUST00000199020 1060 ntBASIC1.39□□□□□ -2.19
Chd3B1AR17 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1.39□□□□□ -2.19
Chd3B1AR17 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.39□□□□□ -2.19
Chd3B1AR17 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Chd3B1AR17 Gm22247-201ENSMUST00000082476 131 ntBASIC1.39□□□□□ -2.19
Chd3B1AR17 Gm25257-201ENSMUST00000083907 110 ntBASIC1.39□□□□□ -2.19
Chd3B1AR17 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.39□□□□□ -2.19
Chd3B1AR17 Gm22543-201ENSMUST00000104347 94 ntBASIC1.39□□□□□ -2.19
Chd3B1AR17 Gm12096-201ENSMUST00000121149 829 ntBASIC1.39□□□□□ -2.19
Chd3B1AR17 Gm25335-201ENSMUST00000158043 103 ntBASIC1.39□□□□□ -2.19
Chd3B1AR17 Gm23181-201ENSMUST00000158685 110 ntBASIC1.39□□□□□ -2.19
Chd3B1AR17 Gm8207-201ENSMUST00000171204 502 ntBASIC1.39□□□□□ -2.19
Chd3B1AR17 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC1.39□□□□□ -2.19
Chd3B1AR17 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.39□□□□□ -2.19
Chd3B1AR17 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.39□□□□□ -2.19
Chd3B1AR17 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm14358-201ENSMUST00000118458 403 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm14238-201ENSMUST00000120227 323 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm14599-201ENSMUST00000120469 474 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm26256-201ENSMUST00000122499 186 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm16354-201ENSMUST00000155376 150 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm23538-201ENSMUST00000157535 101 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm23120-201ENSMUST00000157654 287 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm17061-201ENSMUST00000163167 499 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm28838-201ENSMUST00000186338 315 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm29635-201ENSMUST00000187221 315 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm29026-201ENSMUST00000187787 315 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm28797-201ENSMUST00000188543 315 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm28855-201ENSMUST00000188680 315 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm28705-201ENSMUST00000189548 315 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm28939-201ENSMUST00000190351 315 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm28223-201ENSMUST00000190469 315 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm29092-201ENSMUST00000190768 315 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm42533-201ENSMUST00000196247 157 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm9068-201ENSMUST00000217393 455 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm2446-201ENSMUST00000220144 772 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 CT030184.1-201ENSMUST00000222393 416 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm11845-201ENSMUST00000117886 327 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm23636-201ENSMUST00000175070 95 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm28825-201ENSMUST00000186233 238 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm5317-201ENSMUST00000204445 847 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Gm45439-201ENSMUST00000211723 359 ntBASIC1.38□□□□□ -2.19
Chd3B1AR17 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms