Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm23588-201ENSMUST00000157659 99 ntBASIC0.82□□□□□ -2.28
Col6a4A2AX52 Gm22535-201ENSMUST00000158174 119 ntBASIC0.82□□□□□ -2.28
Col6a4A2AX52 Gm22136-201ENSMUST00000158751 268 ntBASIC0.82□□□□□ -2.28
Col6a4A2AX52 Gm25368-201ENSMUST00000158847 131 ntBASIC0.82□□□□□ -2.28
Col6a4A2AX52 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC0.82□□□□□ -2.28
Col6a4A2AX52 Gm20058-201ENSMUST00000186939 284 ntBASIC0.82□□□□□ -2.28
Col6a4A2AX52 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
Col6a4A2AX52 Gm29011-201ENSMUST00000191059 712 ntBASIC0.82□□□□□ -2.28
Col6a4A2AX52 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC0.82□□□□□ -2.28
Col6a4A2AX52 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
Col6a4A2AX52 Gm34701-202ENSMUST00000204685 360 ntBASIC0.82□□□□□ -2.28
Col6a4A2AX52 AC123803.1-201ENSMUST00000216093 189 ntBASIC0.82□□□□□ -2.28
Col6a4A2AX52 Gm25126-201ENSMUST00000083343 102 ntBASIC0.82□□□□□ -2.28
Col6a4A2AX52 Gm13239-201ENSMUST00000119920 637 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm23958-201ENSMUST00000157207 105 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm25994-201ENSMUST00000175392 101 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm22392-201ENSMUST00000177971 107 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Col6a4A2AX52 Mir6381-201ENSMUST00000183426 87 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm21064-202ENSMUST00000190583 278 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm44058-201ENSMUST00000204335 467 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm45965-201ENSMUST00000221192 1284 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 AC131068.1-201ENSMUST00000226891 482 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 AC027184.1-201ENSMUST00000226991 424 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm44286-201ENSMUST00000204098 1487 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Col6a4A2AX52 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm23691-201ENSMUST00000101878 107 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm14594-201ENSMUST00000118052 537 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm14590-201ENSMUST00000118934 537 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm26256-201ENSMUST00000122499 186 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC0.81□□□□□ -2.28
Col6a4A2AX52 Mir5129-201ENSMUST00000174938 78 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm22776-201ENSMUST00000178634 94 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm23767-201ENSMUST00000179278 94 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm14596-201ENSMUST00000180268 537 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm14595-201ENSMUST00000180335 537 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Mir8106-201ENSMUST00000184520 139 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm36891-201ENSMUST00000191995 655 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm42924-201ENSMUST00000197261 185 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.81□□□□□ -2.28
Col6a4A2AX52 AC188459.1-201ENSMUST00000216651 300 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Platr25-208ENSMUST00000222602 939 ntBASIC0.81□□□□□ -2.28
Col6a4A2AX52 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
Col6a4A2AX52 Gm15215-201ENSMUST00000117773 489 ntBASIC0.8□□□□□ -2.28
Col6a4A2AX52 Gm14840-201ENSMUST00000122135 594 ntBASIC0.8□□□□□ -2.28
Col6a4A2AX52 Gm5277-201ENSMUST00000164923 556 ntBASIC0.8□□□□□ -2.28
Col6a4A2AX52 Gm17038-201ENSMUST00000166586 494 ntBASIC0.8□□□□□ -2.28
Col6a4A2AX52 Snord87-201ENSMUST00000175437 87 ntBASIC0.8□□□□□ -2.28
Col6a4A2AX52 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC0.8□□□□□ -2.28
Col6a4A2AX52 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC0.8□□□□□ -2.28
Col6a4A2AX52 Gm26435-201ENSMUST00000179026 107 ntBASIC0.8□□□□□ -2.28
Col6a4A2AX52 Gm24969-201ENSMUST00000180331 79 ntBASIC0.8□□□□□ -2.28
Col6a4A2AX52 Gm43007-201ENSMUST00000197618 291 ntBASIC0.8□□□□□ -2.28
Col6a4A2AX52 Gm22980-201ENSMUST00000082608 70 ntBASIC0.8□□□□□ -2.28
Col6a4A2AX52 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Col6a4A2AX52 Gm381-201ENSMUST00000117443 2037 ntBASIC0.8□□□□□ -2.28
Col6a4A2AX52 Gm25759-201ENSMUST00000103988 129 ntBASIC0.8□□□□□ -2.28
Col6a4A2AX52 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC0.8□□□□□ -2.28
Col6a4A2AX52 Gm22382-201ENSMUST00000158185 130 ntBASIC0.8□□□□□ -2.28
Col6a4A2AX52 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC0.8□□□□□ -2.28
Col6a4A2AX52 Mir3473c-201ENSMUST00000175262 81 ntBASIC0.8□□□□□ -2.28
Col6a4A2AX52 Gm23355-201ENSMUST00000177614 107 ntBASIC0.8□□□□□ -2.28
Col6a4A2AX52 Gm24304-201ENSMUST00000177635 107 ntBASIC0.8□□□□□ -2.28
Col6a4A2AX52 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Col6a4A2AX52 Gm45071-201ENSMUST00000205353 571 ntBASIC0.8□□□□□ -2.28
Col6a4A2AX52 AC073947.3-201ENSMUST00000215576 766 ntBASIC0.8□□□□□ -2.28
Col6a4A2AX52 CT010480.1-201ENSMUST00000223612 363 ntBASIC0.8□□□□□ -2.28
Col6a4A2AX52 Gm26206-201ENSMUST00000082908 110 ntBASIC0.8□□□□□ -2.28
Col6a4A2AX52 Gm23721-201ENSMUST00000083005 107 ntBASIC0.8□□□□□ -2.28
Col6a4A2AX52 Gm43047-201ENSMUST00000200089 3460 ntBASIC0.79□□□□□ -2.28
Col6a4A2AX52 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC0.79□□□□□ -2.28
Col6a4A2AX52 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Col6a4A2AX52 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC0.79□□□□□ -2.28
Col6a4A2AX52 Gm9703-201ENSMUST00000119573 343 ntBASIC0.79□□□□□ -2.28
Col6a4A2AX52 Gm6587-201ENSMUST00000120219 613 ntBASIC0.79□□□□□ -2.28
Col6a4A2AX52 Gm13602-201ENSMUST00000122405 493 ntBASIC0.79□□□□□ -2.28
Col6a4A2AX52 Gm25454-201ENSMUST00000157947 315 ntBASIC0.79□□□□□ -2.28
Col6a4A2AX52 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC0.79□□□□□ -2.28
Col6a4A2AX52 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
Col6a4A2AX52 Gm29231-201ENSMUST00000179850 319 ntBASIC0.79□□□□□ -2.28
Col6a4A2AX52 Gm42739-201ENSMUST00000200687 226 ntBASIC0.79□□□□□ -2.28
Col6a4A2AX52 Gm44472-201ENSMUST00000204922 943 ntBASIC0.79□□□□□ -2.28
Col6a4A2AX52 Gm44962-201ENSMUST00000206460 279 ntBASIC0.79□□□□□ -2.28
Col6a4A2AX52 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC0.79□□□□□ -2.28
Col6a4A2AX52 AC167977.2-201ENSMUST00000225676 682 ntBASIC0.79□□□□□ -2.28
Col6a4A2AX52 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Col6a4A2AX52 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Col6a4A2AX52 Mir125b-2-201ENSMUST00000083538 71 ntBASIC0.79□□□□□ -2.28
Col6a4A2AX52 Gm23733-201ENSMUST00000083750 106 ntBASIC0.79□□□□□ -2.28
Col6a4A2AX52 Gm19194-201ENSMUST00000192015 3774 ntBASIC0.79□□□□□ -2.28
Col6a4A2AX52 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Col6a4A2AX52 Gm11854-201ENSMUST00000117839 446 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 Gm16359-201ENSMUST00000124511 289 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 Gm2830-201ENSMUST00000140330 385 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 Gm23605-201ENSMUST00000157255 127 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 Gm24056-201ENSMUST00000158617 146 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 121.5 ms