Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
Scn3aA2ASI5 Gm43955-201ENSMUST00000204332 142 ntBASIC1.7□□□□□ -2.14
Scn3aA2ASI5 Gm44472-201ENSMUST00000204922 943 ntBASIC1.7□□□□□ -2.14
Scn3aA2ASI5 AC160031.2-201ENSMUST00000218242 274 ntBASIC1.7□□□□□ -2.14
Scn3aA2ASI5 AC192616.3-201ENSMUST00000220797 1124 ntBASIC1.7□□□□□ -2.14
Scn3aA2ASI5 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC1.7□□□□□ -2.14
Scn3aA2ASI5 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Scn3aA2ASI5 Gm26228-201ENSMUST00000082512 107 ntBASIC1.7□□□□□ -2.14
Scn3aA2ASI5 Gm25080-201ENSMUST00000082526 107 ntBASIC1.7□□□□□ -2.14
Scn3aA2ASI5 Gm24268-201ENSMUST00000082990 110 ntBASIC1.7□□□□□ -2.14
Scn3aA2ASI5 Gm25518-201ENSMUST00000083864 107 ntBASIC1.7□□□□□ -2.14
Scn3aA2ASI5 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Scn3aA2ASI5 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.69□□□□□ -2.14
Scn3aA2ASI5 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Scn3aA2ASI5 Gm25220-201ENSMUST00000157546 95 ntBASIC1.69□□□□□ -2.14
Scn3aA2ASI5 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.69□□□□□ -2.14
Scn3aA2ASI5 Snord116l12-201ENSMUST00000179816 94 ntBASIC1.69□□□□□ -2.14
Scn3aA2ASI5 Gm27755-201ENSMUST00000184623 132 ntBASIC1.69□□□□□ -2.14
Scn3aA2ASI5 Gm29216-201ENSMUST00000187117 492 ntBASIC1.69□□□□□ -2.14
Scn3aA2ASI5 Gm19123-201ENSMUST00000190716 651 ntBASIC1.69□□□□□ -2.14
Scn3aA2ASI5 Gm43723-201ENSMUST00000196886 189 ntBASIC1.69□□□□□ -2.14
Scn3aA2ASI5 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.69□□□□□ -2.14
Scn3aA2ASI5 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.69□□□□□ -2.14
Scn3aA2ASI5 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Scn3aA2ASI5 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.69□□□□□ -2.14
Scn3aA2ASI5 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Scn3aA2ASI5 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Gm22270-201ENSMUST00000104034 132 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Gm24126-201ENSMUST00000104111 106 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Gm15183-201ENSMUST00000118933 348 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Gm15167-201ENSMUST00000121997 187 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Gm23559-201ENSMUST00000157824 103 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Gm24962-201ENSMUST00000157917 109 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Mir3096-201ENSMUST00000116685 71 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Gm15211-201ENSMUST00000118932 528 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Gm16428-201ENSMUST00000121193 723 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Gm26256-201ENSMUST00000122499 186 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Gm23000-201ENSMUST00000157083 139 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Gm22843-201ENSMUST00000157710 134 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Gm17062-201ENSMUST00000166987 461 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Gm22584-201ENSMUST00000177935 92 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Gm44024-201ENSMUST00000203008 476 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Gm44135-201ENSMUST00000205221 368 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 AC123803.1-201ENSMUST00000216093 189 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 AC153529.1-201ENSMUST00000217818 370 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 AC101677.1-201ENSMUST00000218590 158 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Scn3aA2ASI5 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Scn3aA2ASI5 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Scn3aA2ASI5 Gm25068-201ENSMUST00000103895 110 ntBASIC1.67□□□□□ -2.14
Scn3aA2ASI5 Gm14894-201ENSMUST00000117170 270 ntBASIC1.67□□□□□ -2.14
Scn3aA2ASI5 Gm13876-201ENSMUST00000118451 261 ntBASIC1.67□□□□□ -2.14
Scn3aA2ASI5 Gm23332-201ENSMUST00000157424 275 ntBASIC1.67□□□□□ -2.14
Scn3aA2ASI5 Gm23586-201ENSMUST00000157657 123 ntBASIC1.67□□□□□ -2.14
Scn3aA2ASI5 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.67□□□□□ -2.14
Scn3aA2ASI5 Gm37449-201ENSMUST00000193016 270 ntBASIC1.67□□□□□ -2.14
Scn3aA2ASI5 Gm18658-201ENSMUST00000195558 270 ntBASIC1.67□□□□□ -2.14
Scn3aA2ASI5 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.67□□□□□ -2.14
Scn3aA2ASI5 Gm43114-201ENSMUST00000198298 343 ntBASIC1.67□□□□□ -2.14
Scn3aA2ASI5 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.67□□□□□ -2.14
Scn3aA2ASI5 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.67□□□□□ -2.14
Scn3aA2ASI5 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.67□□□□□ -2.14
Scn3aA2ASI5 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Scn3aA2ASI5 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.66□□□□□ -2.14
Scn3aA2ASI5 Gm23221-201ENSMUST00000158118 93 ntBASIC1.66□□□□□ -2.14
Scn3aA2ASI5 Gm17085-201ENSMUST00000165425 502 ntBASIC1.66□□□□□ -2.14
Scn3aA2ASI5 Gm28058-201ENSMUST00000186421 264 ntBASIC1.66□□□□□ -2.14
Scn3aA2ASI5 Gm43652-201ENSMUST00000196219 675 ntBASIC1.66□□□□□ -2.14
Scn3aA2ASI5 Gm31230-201ENSMUST00000199725 785 ntBASIC1.66□□□□□ -2.14
Scn3aA2ASI5 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.66□□□□□ -2.14
Scn3aA2ASI5 AC091260.1-201ENSMUST00000216112 229 ntBASIC1.66□□□□□ -2.14
Scn3aA2ASI5 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.66□□□□□ -2.14
Scn3aA2ASI5 Gm7065-201ENSMUST00000222150 474 ntBASIC1.66□□□□□ -2.14
Scn3aA2ASI5 AC112935.1-201ENSMUST00000227603 250 ntBASIC1.66□□□□□ -2.14
Scn3aA2ASI5 Mir452-201ENSMUST00000093629 85 ntBASIC1.66□□□□□ -2.14
Scn3aA2ASI5 Mir465c-2-201ENSMUST00000104757 81 ntBASIC1.66□□□□□ -2.14
Scn3aA2ASI5 Gm16354-201ENSMUST00000155376 150 ntBASIC1.66□□□□□ -2.14
Scn3aA2ASI5 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
Scn3aA2ASI5 Gm4076-201ENSMUST00000179230 965 ntBASIC1.66□□□□□ -2.14
Scn3aA2ASI5 Gm27248-201ENSMUST00000184004 166 ntBASIC1.66□□□□□ -2.14
Scn3aA2ASI5 AC112274.2-201ENSMUST00000218436 170 ntBASIC1.66□□□□□ -2.14
Scn3aA2ASI5 Gm24406-201ENSMUST00000083026 128 ntBASIC1.66□□□□□ -2.14
Scn3aA2ASI5 Mir208a-201ENSMUST00000083498 83 ntBASIC1.66□□□□□ -2.14
Scn3aA2ASI5 Mir137-201ENSMUST00000083635 73 ntBASIC1.66□□□□□ -2.14
Scn3aA2ASI5 Mir465c-1-201ENSMUST00000093560 81 ntBASIC1.66□□□□□ -2.14
Scn3aA2ASI5 Gm19428-201ENSMUST00000220512 1995 ntBASIC1.65□□□□□ -2.15
Scn3aA2ASI5 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Scn3aA2ASI5 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.65□□□□□ -2.15
Scn3aA2ASI5 Gm25283-201ENSMUST00000157272 77 ntBASIC1.65□□□□□ -2.15
Scn3aA2ASI5 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.65□□□□□ -2.15
Scn3aA2ASI5 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.65□□□□□ -2.15
Scn3aA2ASI5 Gm23267-201ENSMUST00000178490 132 ntBASIC1.65□□□□□ -2.15
Scn3aA2ASI5 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.65□□□□□ -2.15
Scn3aA2ASI5 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Scn3aA2ASI5 Gm23448-201ENSMUST00000083151 104 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 149.4 ms