Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Gm14823-201ENSMUST00000117698 238 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Gm24438-201ENSMUST00000157893 115 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Gm16285-201ENSMUST00000162999 347 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Gm25933-201ENSMUST00000178943 108 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Gm27624-201ENSMUST00000185047 177 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Gm27919-201ENSMUST00000185163 107 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Gm29073-201ENSMUST00000185563 664 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Gm29352-201ENSMUST00000188054 544 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Gm29350-201ENSMUST00000189141 541 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Gm29165-201ENSMUST00000190655 664 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Gm29211-201ENSMUST00000191470 664 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Gm43676-201ENSMUST00000197532 540 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Gm44336-201ENSMUST00000203696 468 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Gm45386-201ENSMUST00000210194 218 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Gm5374-201ENSMUST00000222868 657 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 AC130477.2-201ENSMUST00000228158 274 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Gm23462-201ENSMUST00000083264 104 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Gm25124-201ENSMUST00000083345 164 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Mir301-201ENSMUST00000083655 86 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Gm26108-201ENSMUST00000083973 191 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Trav12-3A0A075B648 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Gm25090-201ENSMUST00000104000 132 ntBASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Mir3096-201ENSMUST00000116685 71 ntBASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Gm14624-201ENSMUST00000117746 192 ntBASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Gm11410-201ENSMUST00000120053 1143 ntBASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Gm7327-201ENSMUST00000120925 652 ntBASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 n-R5s207-201ENSMUST00000122497 118 ntBASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Gm26278-201ENSMUST00000157098 132 ntBASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Gm22328-201ENSMUST00000158074 112 ntBASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Gm23523-201ENSMUST00000180190 107 ntBASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Gm26991-201ENSMUST00000180950 620 ntBASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Mir7j-201ENSMUST00000184427 122 ntBASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Mir6933-201ENSMUST00000184982 81 ntBASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Gm44446-201ENSMUST00000204864 255 ntBASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Gm45375-201ENSMUST00000210338 280 ntBASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Gm24035-201ENSMUST00000082867 107 ntBASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Mir222-201ENSMUST00000083537 79 ntBASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Mir107-201ENSMUST00000083660 87 ntBASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trav12-3A0A075B648 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Mir743b-201ENSMUST00000104751 77 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm7164-201ENSMUST00000117503 450 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm16242-201ENSMUST00000117741 334 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm11991-201ENSMUST00000119652 1074 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Mup-ps20-201ENSMUST00000121132 389 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm25052-201ENSMUST00000122661 158 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm15281-201ENSMUST00000125181 351 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm24780-201ENSMUST00000157635 143 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm17187-201ENSMUST00000164622 410 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm23379-201ENSMUST00000180026 107 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Mir6355-201ENSMUST00000183687 106 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm29134-201ENSMUST00000186579 126 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm28337-201ENSMUST00000190425 666 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm37923-201ENSMUST00000191624 161 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm31123-201ENSMUST00000192094 666 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm43739-201ENSMUST00000198294 307 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm24412-201ENSMUST00000083426 109 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm26175-201ENSMUST00000083794 131 ntBASIC1.45□□□□□ -2.18
Trav12-3A0A075B648 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.44□□□□□ -2.18
Trav12-3A0A075B648 Mir682-201ENSMUST00000102281 96 ntBASIC1.44□□□□□ -2.18
Trav12-3A0A075B648 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Trav12-3A0A075B648 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Trav12-3A0A075B648 Gm25539-201ENSMUST00000116886 122 ntBASIC1.44□□□□□ -2.18
Trav12-3A0A075B648 Gm11786-201ENSMUST00000120799 155 ntBASIC1.44□□□□□ -2.18
Trav12-3A0A075B648 Gm24892-201ENSMUST00000122747 104 ntBASIC1.44□□□□□ -2.18
Trav12-3A0A075B648 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Trav12-3A0A075B648 Gm26393-201ENSMUST00000157625 129 ntBASIC1.44□□□□□ -2.18
Trav12-3A0A075B648 Gm22517-201ENSMUST00000158265 136 ntBASIC1.44□□□□□ -2.18
Trav12-3A0A075B648 Gm23005-201ENSMUST00000158950 136 ntBASIC1.44□□□□□ -2.18
Trav12-3A0A075B648 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC1.44□□□□□ -2.18
Trav12-3A0A075B648 Gm24656-201ENSMUST00000177548 132 ntBASIC1.44□□□□□ -2.18
Trav12-3A0A075B648 Gm21827-201ENSMUST00000178247 423 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms